Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00058 ATGGACAATATTTGGATTATGGTTGTGACAGCAATTTTCTTATGCACTGTGATCCTCTATAGGAACAGGCTTAGACTTATGCTCAAATCAAAACACAGAAAGAAGCTTCCATTAGGCACTCTTGGATGGCCTTTTATTGGAGAAACTCTTGAGTTCATTGCTTGTGCTTACACTGATCGCCCTGAGAGCTTCATGGACAAGCGACGCAGCATGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACAATTGTTTCCACGGATGCAGATGTGAATAAATTTATACTGCAAAGTGATGCAAAGATTTTCATTCCTTCTTACCCCAAGTCTCTCATGAAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCTTACAAAGGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATTACCAGAGATATGCAGAAGTATGTCCAAGAATCAATGGCAAATTGGAGGGAGGACTACCCCATATACATACAAGATGAAACAAAAAAGATTGCCTTTCAGGTGCTAGTCAAGGCATTGATTAGTTTGGATCCAGGTGAAGAAATGGATCTCCTAAAGAAAAAATTTCAGGAATTTATCTCTGGCCTCATGTCTTTACCAATAAACCTACCAGGAACTAAACTTCATCAATCTTTACAGGCAAAAAAGAAAATGGTGAAATTAGTGCATAGAACTATCCAAGCTAGAAGAAATAGTGGCATCTCGAAAGTTCCAAAAGATGTAGTGGATGTGCTACTTAATGATGCAAATGAAAAGCTGACAGATGATTTAATAGCAGATAATACTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCTGTTCTTATGACTCTAGCTACAAAGTACCTATCAGAATGTCCTGCTGCTTTGCAACAATTGACAGAGGAAAATATGGAGCTTAAGAAACTCAAAGATCAGCTTGGGGAGCCCCTGTGTTGGAGTGATTACTTATCATTGCCATTCACTCAAACAGTTATCACAGAAACTTTGAGAATGGGAAATATTATAATTGGAGCTATGAGAAAGGCAGTAAAAGATATTGAAATAAAAGGGTATATAATACCACAAGGGTGGTGTGTGCTTGCAAATTTAAGATCAGTTCATCTAGATGAGAAAAACTATGAGCGGCCATATCAATTCAATCCATGGAGGTGGAAAGATAAAGACACAAGCAGTTGCTATTTCACTCCTTTTGGAGGGGGACAAAGGCTTTGCCCTGGCCTTGACTTGGCCAGGCTGGAAGCTTCTATCTTCCTACACCACTTTGTTACTCAATTTAGATGGTATGCTGAAGAAGATGCAATAGTGAACTTCCCCACAGTAAGAATGAAAAAAAGGATGCCTATCTGGGTTAAGAGGGTGGAACCTTGA 1422 0.3966 MDNIWIMVVTAIFLCTVILYRNRLRLMLKSKHRKKLPLGTLGWPFIGETLEFIACAYTDRPESFMDKRRSMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKIFIPSYPKSLMKLMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVQESMANWREDYPIYIQDETKKIAFQVLVKALISLDPGEEMDLLKKKFQEFISGLMSLPINLPGTKLHQSLQAKKKMVKLVHRTIQARRNSGISKVPKDVVDVLLNDANEKLTDDLIADNTIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMELKKLKDQLGEPLCWSDYLSLPFTQTVITETLRMGNIIIGAMRKAVKDIEIKGYIIPQGWCVLANLRSVHLDEKNYERPYQFNPWRWKDKDTSSCYFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWYAEEDAIVNFPTVRMKKRMPIWVKRVEP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00058 473 CDD CYP90-like 68 473 - -
Sebi122g00058 473 Gene3D Cytochrome P450 27 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 Pfam Cytochrome P450 37 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 27 471 - -
Sebi122g00058 473 SUPERFAMILY Cytochrome P450 30 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi122g00058 473 Coils Coil 303 323 - -
Sebi122g00058 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Sebi122g00058 473 PANTHER CYTOCHROME P450 26 33 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00058 Sebi-Chr122 861416 865459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00058 32 444 Cytochrome P450 AT3G13730 66.986 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00058 K12638 - gmx:100782687 837.795