Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00046 ATGGCCTACTTTGGGAATACAATAGAGGAGTGCAATAGACATCATAAATCTACTTTTTGGCTGTGTCTTCTACACGTCTTTGCTTATCAGTTCAATCAGAAGAAGTTCTACAAATGGGAGCAACAGAAAAAGCTTGCCAAAACTGATAACTTTCAGCAGCTGAGCTGGTTAGCTTGCATTATCAGAGGATTCATTTGGATTTCTTTTACAGTTTCTTTGCTTTCTCAGAGATACAAATGGATCAAAATTTTGAACTCTGTCTGGTGGGCAGCTTCCTGTGTATTGGTTTCAGCTCTCAACATTGAAGTTCTGTTCAAAGACCATGCTATTGAAACTTTTGATATTATACAGTGGCTTGTACACTTCCTTCTTCTATTCTGTGCCTTCAAAAATCTTGGTTATTTTCTCACTCAAACTGTTCCAGAAAGTTTGTCTGAGCCACTATTAGCTCAGAAGATTGAAACTAAACAAACAGGACTAGGCCATGCTACCTTTCTCAGCAAGTTGATTTTCTCTTGGGTTAATTCTCTACTCAGTTTGGGTTACTCAAAGTCACTAGCTCTTGAAGAAATCCCTTCCCTTGTTCCTCAAGATGAAGCAGACTCAGCCTATCAAAACTTTGTGCATGCATGGGAATCCCTTGTAAGGGAGAGGAGCAAGAACAATACCAAAAACTTAGTTCTTTGGTCTGTGGTGAGATCTTACTTCAAAGAAAACATATTAATAGCATTTTACGCAATACTCAGAACCATTTCTGTTGCAGTTTCACCTCTAATACTTTATGCTTTTGTAAACTACTCTAATAGTAATAATAGCACTGGGGCAGATCTCAAAGAAGGTCTTTCCATAGTAGGTTTTCTGATTCTCACCAAAGTGGTTGAGTCTTTGTCACAGAGACATTGGTTTTTTGATTCAAGGAGGTCAGGATTGAAAATGAGATCGGCTCTTATGGTGGCAGTCTATAAAAAGCAGTTAAAGCTTTCAAACTCTGCAAGGAGAAGGCACTCAACTGGTGAAATTGTGAATTACATTGCAGTTGATGCATATCGAATGGGAGAATTTCCATGGTGGTTTCATATAACATGGACTTCTGCATTGCAACTTGTTCTGTCCATTGGTATCCTTTTTGGTGTTGTGGGTGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTCATCTGTGGACTTCTCAATATCCCATTTGCAAAGATCCTTCAAAATTGTCAGTCACAGTTTATGATTGCACAGGATGAGCGTCTTAGAGCATTTTCAGAAATTCTAAACAGTATGAAAATCATTAAGTTACAATCCTGGGAGGATAAATTCAAGAACTTAGTTGAGTCCCTACGTGCTAAAGAGTTCATATGGTTGTCTAAGGCACAGATCATGAAAGCTACTGGATCATTTCTTTATTGGATGTCTCCTACCATAGTTTCTTCTGTCGTTTTCCTCGGTTGTGCTCTTTTCAATAGTGCCCCATTGAATGCTGAAACCATTTTCACAGTTCTTGTAACTTTGAGGAACCTGGCAGAACCTGTTCGAATGATTCCAGAGGCTCTATCTATTATGATCCAAGTTCATGTGTCCTTTGATCGTCTCAATACCTTTTTGCTTGATGAAGAGCTAACTAGTGATGATAATGGAAGAAGTATAAAGCAACGTTCAGTTAATGCTGTGGAAATTCATGCTGGCAACTTCATCTGGGATCATGAATCAGTGTCCCCAACTTTAACAAATGTGAATTTGGAAATCAGATGGGGACAGAAAATAGCAGTTTGTGGGCCAGTTGGAGCTGGAAAATCATCTCTTTTGTATGCAATACTTGGAGAGATTCCTAAAATTTTAGGAACTGTTAATGTTAGTGGAAGCCTAGCCTATGTTTCTCAAACTTCTTGGATACAGAGTGGGACAGTTCGAGATAATATACTCTTTGGGAAGCCAATGGACAAAACAAGATATGAGAATGCCATTAGAGTTTGTGCCTTGGATAAGGATTTTAATGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGAGCAGTCTACAATGATGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATTCTTTTCAATGACTGTGTCATGACTGCTCTAAGAGAGAAAACTGTCATCCTAGTGACTCATCAAGTGGAGTTTCTTTCAGAAGTTGATACAATCTTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTAACAGCTGGGACAGCCTTTGAACAACTTGTGAGCGCCCATAAAGAAACAATTACAGAGTTGATCCAGGATAATGAAAATAAAAGAGATTCTGAAAGTGAGGTTATGGCTCATCCAGAAGAGTCTCATGGTTTTTATCTTGTTAAAAGTCAAAGTGAGGGGGAAATTTCTACCAAGGGTCAACTTGGGGTCCAGCTTACACAAGAAGAAGAGAAGGAGATTGGTGATGTGGGCTGGAAGCCATTCTGGGATTATATTTCTTTTTCCAAGGGGGCAATCATGATGTGCTTGATCATGTTAGGACAATCTGCTTTTATTGCTTTTCAGACTGCATCAACTTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACTAGTGCCACCTTGATTGGAGTTTACTCATTGATTTCATTTGCTAGTGCTGCGTTTGTATATGTAAGGTCTTACTGGACTGCACATCTTGGATTAAAGGCTTCTACAGCCTTCTTCTCAAGTTTCACTACGGCTATCTTCAATGCTCCTATGTTGTTCTTTGACTCAACACCTGTAGGAAGGATTTTAACCCGAGCCTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCATCACTTTTGTAGCATGTGTAGCAATTGAAATTCTGGTGACAATTTGTATAATGGCTTCAGTTACATGGCAAGTTCTCATTGTTGCTATTCCTGCAATGGTCGCATCAAAATATGTTCAGGGATATTATCAAGCCTCAGCAAGGGAACTAATAAGGATCAATGGAACCACAAAAGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAACATTCAACATGGTAGACAGATTTTTCAGAAACTACTTAAAACTTGTGGACACAGATGCAACACTGTTCTTTCATTCTAATGTGGCTATGGAATGGTTACTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTGGTCACTGCAGCATTGTTGCTTATTCTAGTTCCTCAGGGATACGTGTCCCCAGGCTTGGTGGGACTGTCTCTTTCTTATGCTTTCAACTTGACAGGAGCTCAAATATTTTGGACTCGATGGTTTTGCAACTTATCAAACTATATTATCTCAGTTGAAAGAATTAAGCAATTTATTCACACACCAGCAGAGCCTCCTGCCATTGTGGAGGATAAACGGCCTCCATCTTCATGGCCTTCCAAGGGCAGGATTGACATTCAAGCCTTAGAGATTAGGTATCGTCCAAATGCTCCATTAGTCCTTAAGGGTATCACTTGTACGTTTAAAGAAGGGAATAGAGTTGGAGTTGTAGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTTTCATAGATGGGATTAACATATGCTCAATGGGTTTGAGGGATTTGAGAATGAATCTAAGCATCATCCCTCAAGAACCAACCCTGTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTTTGGAGAAATGTCAGCTTAAGGGAACAATCAGCAATCTACCAAGTCTCTTGGACTCTTCTGTTAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAACTATTTTGTCTTGGAAGAGTACTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTGTCTTATGGGAAAATGGTAGAATATGATGAGCCGTCAAAGCTAATGGACACAAACTCTTCATTCTCAAAGCTGGTAGCTGAATATTGGTCCAGCTGCAGGAGGAATTCCTCTCCAAATCTTAGTATGAAGCAATAA 4287 0.3982 MAYFGNTIEECNRHHKSTFWLCLLHVFAYQFNQKKFYKWEQQKKLAKTDNFQQLSWLACIIRGFIWISFTVSLLSQRYKWIKILNSVWWAASCVLVSALNIEVLFKDHAIETFDIIQWLVHFLLLFCAFKNLGYFLTQTVPESLSEPLLAQKIETKQTGLGHATFLSKLIFSWVNSLLSLGYSKSLALEEIPSLVPQDEADSAYQNFVHAWESLVRERSKNNTKNLVLWSVVRSYFKENILIAFYAILRTISVAVSPLILYAFVNYSNSNNSTGADLKEGLSIVGFLILTKVVESLSQRHWFFDSRRSGLKMRSALMVAVYKKQLKLSNSARRRHSTGEIVNYIAVDAYRMGEFPWWFHITWTSALQLVLSIGILFGVVGVGALPGLVPLLICGLLNIPFAKILQNCQSQFMIAQDERLRAFSEILNSMKIIKLQSWEDKFKNLVESLRAKEFIWLSKAQIMKATGSFLYWMSPTIVSSVVFLGCALFNSAPLNAETIFTVLVTLRNLAEPVRMIPEALSIMIQVHVSFDRLNTFLLDEELTSDDNGRSIKQRSVNAVEIHAGNFIWDHESVSPTLTNVNLEIRWGQKIAVCGPVGAGKSSLLYAILGEIPKILGTVNVSGSLAYVSQTSWIQSGTVRDNILFGKPMDKTRYENAIRVCALDKDFNDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVIQSGSYENLLTAGTAFEQLVSAHKETITELIQDNENKRDSESEVMAHPEESHGFYLVKSQSEGEISTKGQLGVQLTQEEEKEIGDVGWKPFWDYISFSKGAIMMCLIMLGQSAFIAFQTASTFWLAIAIEIPKVTSATLIGVYSLISFASAAFVYVRSYWTAHLGLKASTAFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVACVAIEILVTICIMASVTWQVLIVAIPAMVASKYVQGYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRTFNMVDRFFRNYLKLVDTDATLFFHSNVAMEWLLLRIEALQNLTVVTAALLLILVPQGYVSPGLVGLSLSYAFNLTGAQIFWTRWFCNLSNYIISVERIKQFIHTPAEPPAIVEDKRPPSSWPSKGRIDIQALEIRYRPNAPLVLKGITCTFKEGNRVGVVGRTGSGKSTLISALFRLVEPSRGDIFIDGINICSMGLRDLRMNLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKGTISNLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKMVEYDEPSKLMDTNSSFSKLVAEYWSSCRRNSSPNLSMKQ 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00046 1428 CDD ABC_6TM_ABCC_D2 859 1152 IPR044726 GO:0140359
Sebi122g00046 1428 Gene3D - 1160 1411 IPR027417 -
Sebi122g00046 1428 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 240 524 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi122g00046 1428 FunFam Multidrug resistance protein associated1 537 801 - -
Sebi122g00046 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 781 IPR003439 GO:0005524
Sebi122g00046 1428 Pfam ABC transporter 576 710 IPR003439 GO:0005524
Sebi122g00046 1428 CDD ABCC_MRP_domain2 1175 1395 - -
Sebi122g00046 1428 SUPERFAMILY ABC transporter transmembrane region 848 1159 IPR036640 GO:0005524|GO:0016020
Sebi122g00046 1428 FunFam ABC transporter C family member 10 223 540 - -
Sebi122g00046 1428 CDD ABC_6TM_ABCC_D1 241 532 IPR044746 GO:0140359
Sebi122g00046 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1167 1410 IPR027417 -
Sebi122g00046 1428 FunFam ABC transporter C family member 3 1160 1411 - -
Sebi122g00046 1428 CDD ABCC_MRP_domain1 558 758 - -
Sebi122g00046 1428 SUPERFAMILY ABC transporter transmembrane region 228 538 IPR036640 GO:0005524|GO:0016020
Sebi122g00046 1428 FunFam ABC transporter C family member 5 826 1158 - -
Sebi122g00046 1428 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 865 1127 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi122g00046 1428 Pfam ABC transporter 1194 1342 IPR003439 GO:0005524
Sebi122g00046 1428 SMART AAA_5 585 758 IPR003593 GO:0016887
Sebi122g00046 1428 SMART AAA_5 1203 1388 IPR003593 GO:0016887
Sebi122g00046 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 556 780 IPR027417 -
Sebi122g00046 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1179 1411 IPR003439 GO:0005524
Sebi122g00046 1428 Pfam ABC transporter transmembrane region 240 503 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi122g00046 1428 Pfam ABC transporter transmembrane region 862 1124 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi122g00046 1428 Gene3D - 565 808 IPR027417 -
Sebi122g00046 1428 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 162 1413 - -
Sebi122g00046 1428 Gene3D ABC transporter type 1, transmembrane domain 828 1158 IPR036640 GO:0005524|GO:0016020
Sebi122g00046 1428 Gene3D ABC transporter type 1, transmembrane domain 215 540 IPR036640 GO:0005524|GO:0016020
Sebi122g00046 1428 ProSitePatterns ABC transporters family signature. 683 697 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00046 Sebi-Chr122 647341 653147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00046 536 772 Calmodulin-binding Proteins AT2G36910 27.668 2.11e-20 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00046 - - gmx:100784827 2325.05