Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00033 ATGGCGACAGTACCAGGTCAGCTCGTGTGGGAGATCGTGAAGAAGAACAACTCATTTTTGGTGAAAGAGTTTGGAAGAGGCACTCAGAGTGTTGAATTCAGCAAAGAGAGCAACAATCTCTATAATCTCAACTCTTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGTGGGTAAAGATCTGTCTGTGTTGTTGGCTACAACCAAGACAAAGAAACAAAACAAGCCTTCTGCTTTGCTTCACAAATCGGTCATGAAGAAGGAGTTCAGGAGGATGGCAAAGGCTGTCCAAAATCAGGTGGCAGATAATTACTACAGGCCTGATCTGAAGAAAGCAGCTCTTGCAAGGTTGAGTGCCGTTAACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTCAAGAAGAGGAATAGACAGGCTGTGAAGGTCCGTGGTAGGAAGTGA 453 0.4481 MATVPGQLVWEIVKKNNSFLVKEFGRGTQSVEFSKESNNLYNLNSFKYSGLANKKTVTIQPVGKDLSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKVRGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00033 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Sebi122g00033 150 FunFam 60S ribosomal protein L28 5 133 - -
Sebi122g00033 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Sebi122g00033 150 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00033 Sebi-Chr122 449402 451128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00033 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 73.427 7.26e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00033 K02903 - gmx:100500189 273.863