Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00021 ATGATGCCAATGTTTCTTCATTTTCTTTTCGTATTGCTTGGAGTCCTTACTGTTGTGGTTCTGGTGCAAGCTCAGGATCAATCAGATTGTGGGCTACCTGAAAAATCGAGCTATACAGAGAAGAACACAAGCATCAATTACATTTCAGATGCTAAATTCATAGATGCTGGTGTAAGCAAGAGTATATCACCAGAAGAGAAGATTCATCATCAACAACAATTAGCTCATGTGAGGAGCTTTCCTAGTGGAGTGAGAAACTGTTACAGAATAAATGTAACCAGTGGCACAAAATATTTAATCCGAGCTTCTTTCTATTATGGAAACTATGATGGTCACCTTCATCTTGGAGATAATTTTTGGGAAACAGTGAAGTTCCTTAATGCATCACTCAGCAGAATCAGTGAGATCATATACACCCCATCACTAGACCATATACATCTGTGTCTGGTCAACACTGGCACAGGGACACCATTCATTTCAGCTATAGAATTGAGGATTTTGAACAATGGTACTTATGACACTCACTCAACTGATGAAACATTGGCAATCTTTGGCCGATATAATTTTGGCACCAACCACAACAAAGTATACAGGTACAAAGATGATGTTTATGACCGCCTCTGGGGGATTGATCCATTCAAGTTTTGGAAACCATTAAATACCTCATTAGGCCCTGATGATCTTGGTCAGAATAAATATAAACCACCAGCAGTTGTCATGAGCACGGCTGCTACACCAATAAATGCCAGTGCTCCTCTCGAGTTCTCTTGGGATTCGGATAATGTAAACGAAAAGTACTACATCTACATGCACTTTAATGAGGTTGAAAAGCTCACAACAAATGAATCAAGAGCATTTGATATCTACATGAATGACAAGCATTGGTATGGACCTCTGGTACCTTTATACCAAATAACAACTACCGTACTTAGTACATCAGCTTTGACCGGAGCCACAAGCTATACAATTTCACTTTCTAAGACAGAGAATTCCACCCTTCCACCCATCATCAATGCCGTTGAGATTTATACAGTAAAAGATTTCTCACAATCAGAAACTCAACAAGATGATGTTGATGCTATCACAAACATCAAGAAAGCCTATGGAGTGGCTAGAAATTGGCAAGGAGATCCATGTGCCCCTGTAGCATACATGTGGGAAGGCCTAAACTGCAGTTTTGATAGCAATAACCCCCCAAGAATTACATCTTTGAACTTGTCTTCAAGTGGACTGACCGGGCAAATAGCATCTTCCATCTCCAAGCTCACTATGTTACAGTACTTGGATTTATCTAACAATAGCTTAACCGGTCCAATACCTGATTTCCTGACACAACTTCAGTCACTAAAAGTCTTAAACTTGGGGAAGAACAACCTCACAGGTTTAGTTCCTAGTGGACTCATTGACAGATCAAAACAAGGTTCACTATCATTGAGCATAGAGCAAAATCCAAATCTATGTGAATCTACTTCATGCAACCAACAGACAGATGATCATAAGAAGAAGAAGAAAAATATAGCTATCCCCATAGTAGCATCAGTTGCTGGGATTTTGGTGCTTCTAGTAATCGTAGTAGCAGCTATAATTTGTGGCCTTAAAAAAAGAAAACCACGAGCAACTGTGAACAGTCAAGTGGAGCCTAATACTCCGAATGAGTCACAACTGGAATCCAAGCAAAGACAATATACATTCAATGATCTTACTATTATCACCAACAACTTTGATAGGATTCTTGGTAGAGGTGGATTTGGAACAGTTTATCATGGCCTTATTGACGACACCCAAGTTAAACTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATTGGTTATTGCAATGAAGACAACAATATAGGGCTCATCTATGAATATATGGCAAATGGAAACCTGGATGAACATCTTTCGGGAAAATATAGCAGGGCAAAGCTCTTCACTTGGGAAGATAGACTCCGAATAGCAATAGATGCAGCCCAAGGACTGGAATATCTGCATAATGGTTGTAAGTCACCTATAATCCACAAAGATGTGAAAACTACAAATATTTTATTAAATGAAAACTTCCAAGCAAAACTGGCTGATTTTGGCCTATCCAAAACCTTTCCCACTGATGGAGGCACACATCTGTCCACTGTTGTTGCTGGAACTCCTGGTTACCTTGATCCTGAGTACAAGATATCAAGTAGGTTGACAGAGAAAAGTGATGTTTACAGCTTTGGAGTTGTTCTTTTGGAGATAATCACAAGTCAACCAGCTATTTCAAAAACGCATGAGAAGATTCACATAAGTCAGTGGGTTAGCTCTATGCTTTCTAATGGAGATATTAAAAATATTGTTGACTCAAGATTACATGAAGACTTTGAGACTAGCTCTGTTTGGAGAGCTGTTGAAATAGGAATGGCTCCTGTGTCCAACAATCCTGCCAGAAGGCCAAGATGTTGTGAACGAGTTAAAAGGAGTGTTTGGCTACAGAGTTAG 2481 0.3934 MMPMFLHFLFVLLGVLTVVVLVQAQDQSDCGLPEKSSYTEKNTSINYISDAKFIDAGVSKSISPEEKIHHQQQLAHVRSFPSGVRNCYRINVTSGTKYLIRASFYYGNYDGHLHLGDNFWETVKFLNASLSRISEIIYTPSLDHIHLCLVNTGTGTPFISAIELRILNNGTYDTHSTDETLAIFGRYNFGTNHNKVYRYKDDVYDRLWGIDPFKFWKPLNTSLGPDDLGQNKYKPPAVVMSTAATPINASAPLEFSWDSDNVNEKYYIYMHFNEVEKLTTNESRAFDIYMNDKHWYGPLVPLYQITTTVLSTSALTGATSYTISLSKTENSTLPPIINAVEIYTVKDFSQSETQQDDVDAITNIKKAYGVARNWQGDPCAPVAYMWEGLNCSFDSNNPPRITSLNLSSSGLTGQIASSISKLTMLQYLDLSNNSLTGPIPDFLTQLQSLKVLNLGKNNLTGLVPSGLIDRSKQGSLSLSIEQNPNLCESTSCNQQTDDHKKKKKNIAIPIVASVAGILVLLVIVVAAIICGLKKRKPRATVNSQVEPNTPNESQLESKQRQYTFNDLTIITNNFDRILGRGGFGTVYHGLIDDTQVKLLMRVHHKNLTSLIGYCNEDNNIGLIYEYMANGNLDEHLSGKYSRAKLFTWEDRLRIAIDAAQGLEYLHNGCKSPIIHKDVKTTNILLNENFQAKLADFGLSKTFPTDGGTHLSTVVAGTPGYLDPEYKISSRLTEKSDVYSFGVVLLEIITSQPAISKTHEKIHISQWVSSMLSNGDIKNIVDSRLHEDFETSSVWRAVEIGMAPVSNNPARRPRCCERVKRSVWLQS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00021 826 Pfam Malectin-like domain 29 345 IPR024788 -
Sebi122g00021 826 MobiDBLite consensus disorder prediction 539 558 - -
Sebi122g00021 826 PRINTS Leucine-rich repeat signature 446 459 - -
Sebi122g00021 826 PRINTS Leucine-rich repeat signature 425 438 - -
Sebi122g00021 826 Gene3D Phosphorylase Kinase; domain 1 553 595 - -
Sebi122g00021 826 Gene3D Ribonuclease Inhibitor 358 486 IPR032675 -
Sebi122g00021 826 SMART serkin_6 572 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00021 826 FunFam Leucine-rich repeat receptor-like kinase 356 489 - -
Sebi122g00021 826 Pfam Protein tyrosine and serine/threonine kinase 595 754 IPR001245 GO:0004672|GO:0006468
Sebi122g00021 826 SUPERFAMILY L domain-like 384 476 - -
Sebi122g00021 826 MobiDBLite consensus disorder prediction 541 558 - -
Sebi122g00021 826 Pfam Leucine rich repeat 399 459 IPR001611 GO:0005515
Sebi122g00021 826 Gene3D Phosphorylase Kinase; domain 1 596 627 - -
Sebi122g00021 826 Gene3D Transferase(Phosphotransferase) domain 1 628 825 - -
Sebi122g00021 826 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 627 821 - -
Sebi122g00021 826 PANTHER OS07G0107800 PROTEIN-RELATED 29 817 - -
Sebi122g00021 826 Gene3D - 185 346 - -
Sebi122g00021 826 SUPERFAMILY Protein kinase-like (PK-like) 552 817 IPR011009 -
Sebi122g00021 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Sebi122g00021 826 ProSiteProfiles Protein kinase domain profile. 572 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00021 Sebi-Chr122 333053 336859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00021 8 818 Receptor kinase-like Gene Family AT1G51800 46.542 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi122g00021 Malectin_like 5.3e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00021 - - aprc:113849011 1145.18