Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00020 ATGAAATTCGAACTATACACAGTACCCCACAGGCATCAATTACATTCAGATGCTAAATTCGTAGATACTGGTGTCAGTAGGAGAGTATCACCACAGATAAGAGTTATTCTAAAACAGCAACTACGTTATGTGAGGAGCTTTCCTAGTGGAGTGAGAAACTGTTACAGAATAAATGTAGCCATGGCACCAAAATATTTAATCCGAGCTTCTTTCTATTATGGAAACTACGATGATCTAAATCAGGCGCCACAATTTGATCTTCATCTTGGACCTAATATTTGGGATACAGTGAAGTTCTCCAATGCATCACTAGTCTTATACCGTGAGATCATTCACACTCCATCACAGAATTATATACATCCGTGTCTGGTTAACACAGGCACAGGAATTCCATTCATTTCAGCCATAGAATTGAGGATTTTGAATGACAAAACTTATAACACTGACACAATTACTGGATCATTGGCACTCCTCGGACGATACGATATCGGTTCCATCACCAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATCTGGATGCCTATGTATTCCAAGGGGTGGACACCCAAAAGCACATCATACATAAAATCCTACTTCAGAATGAATATACCCGCCAGCAGTTGTCATGAACACGGCGGCTACAACCAAACAGAGAATTCTACCCTTCCTCCCATCCTCAATGCCTTTGAGTTTTATATGGTAAAAGATTTCTCACAATCAGAAACTCAACAAGACGATGTTAATGCTATCACAAACATCAAGAACGCTTACGGGGTGCCTAGAAATTGGCAAGGAGATCCATGTGCCCCTGTTGCATACATAGATTTGTCTTCAAGTGGACTGACCGGGCAAATAGCATCTTCCATCTCCAAGCTCACTATGTTACAGTACTTGGATTTATCAAACAACAGCTTAAGTGGTCCAGTACCTGATTTTCTGACACAAATGCAGTCACTAAAAGTCTTAAACTTGGGGAAGAACAACCTTACAGGTTTAGTTCCTAGTGGACTAATTGACAGATCAAAAAAAGGTTCACTATCATTGAGCGTGGAGCAAAATCCAAATCTATGTGAATCTGCTTTATGCAACCAGGAGACAGATAATCAGAAGAAGAAAAATACCATTGTTATTCCAGTATTAGCATCAGTTGCTGGGGTTTTGGTGCGCCTAGCAATTGCAGCAGTAGCTATTGTTTGTGGCCTTAAAAAAAATAGACCACGAGAAACCAATATAGGGCTCATATATGAATATATGGCAAATGGAAACCTGGATGAACATCTTTCAGGAAAACATAGCATGGCAAAGTTCTTCACTTGGGAGGACAGACTTCGAATAGCAGTGGATGCAGCCCAAGGACTGGAATATTTGCATAATGGTTGCAAGCCACCTATAATCCACAGAGATGTGAAAACTACAAATATTTTATTAAATGAAAATTTCCAAGCAAAATTGGCAGATTTTGGCCTATCCAAAACCTTTCCCACTGATGGATGGACACATTTGTCCACTGTTGTTGCTGGAACTCCTGGTTACCTTGATCCTGAGTATGGCATATCAAGCAGGCTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAGATAATCACAAGTCAACCAGCTATATCAAAAGCACCAGAGAAGATTCACATAAGTCAGTGGGTTAGCTCCTTGCTTTCTAATGGAGATATTAAAAATATTGTTGACTCAAGATTACATGAAGACTTTGACACTAGCTCTGCCTGGAAAGCTATTGAATTAGGAATGGCTTCTGTGTCTATCAATCCTAACAGAAGGCCAAACATGAGTGACATAGTGACTGAGCTAAAGGAGTGTTTGACTGCAGAATTAGCACGAAAAAGGTCTGGTGGTGACACTGAAAACATCGATTCAGTTGAGTTAGTATCCTTAAATCTGGAAACTGAATTCTGTCCCCTAGCTAGGTAG 1965 0.3995 MKFELYTVPHRHQLHSDAKFVDTGVSRRVSPQIRVILKQQLRYVRSFPSGVRNCYRINVAMAPKYLIRASFYYGNYDDLNQAPQFDLHLGPNIWDTVKFSNASLVLYREIIHTPSQNYIHPCLVNTGTGIPFISAIELRILNDKTYNTDTITGSLALLGRYDIGSITNLEYRYKDDVYDRIWMPMYSKGWTPKSTSYIKSYFRMNIPASSCHEHGGYNQTENSTLPPILNAFEFYMVKDFSQSETQQDDVNAITNIKNAYGVPRNWQGDPCAPVAYIDLSSSGLTGQIASSISKLTMLQYLDLSNNSLSGPVPDFLTQMQSLKVLNLGKNNLTGLVPSGLIDRSKKGSLSLSVEQNPNLCESALCNQETDNQKKKNTIVIPVLASVAGVLVRLAIAAVAIVCGLKKNRPRETNIGLIYEYMANGNLDEHLSGKHSMAKFFTWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKTTNILLNENFQAKLADFGLSKTFPTDGWTHLSTVVAGTPGYLDPEYGISSRLTEKSDVYSFGVVLLEIITSQPAISKAPEKIHISQWVSSLLSNGDIKNIVDSRLHEDFDTSSAWKAIELGMASVSINPNRRPNMSDIVTELKECLTAELARKRSGGDTENIDSVELVSLNLETEFCPLAR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00020 654 SMART serkin_6 377 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00020 654 PANTHER OS07G0107800 PROTEIN-RELATED 411 619 - -
Sebi122g00020 654 ProSiteProfiles Protein kinase domain profile. 274 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00020 654 SUPERFAMILY L domain-like 247 344 - -
Sebi122g00020 654 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 421 628 - -
Sebi122g00020 654 FunFam Leucine-rich repeat receptor-like kinase 248 362 - -
Sebi122g00020 654 Pfam Malectin-like domain 15 199 IPR024788 -
Sebi122g00020 654 Pfam Protein kinase domain 410 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00020 654 Gene3D Ribonuclease Inhibitor 237 359 IPR032675 -
Sebi122g00020 654 Gene3D Transferase(Phosphotransferase) domain 1 421 638 - -
Sebi122g00020 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Sebi122g00020 654 SUPERFAMILY Protein kinase-like (PK-like) 412 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00020 Sebi-Chr122 295251 299057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00020 413 654 Receptor kinase-like Gene Family AT1G51890 59.504 6.24e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi122g00020 Pkinase 3.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00020 - - cpep:111806735 465.307