Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00018 ATGGGAATAATGTCTCTGCATTTTCGTTTGCTATTGCTTGGGTTCCTTACTATTGTCGTTCTCGTGCAAGCTCAGGATCAATCAGGATTCATTAGCATAGATTGTGGATTACCTGAAAAATCGAGCTATACTGAGCCGACCACAGGCATCAATTACATTTCAGATACTAAATTCATAGATACAGGTGTGAGTCAGAGTATATCACCAACAGAGAAGGCTTCTCGTCAACAGCAACTAGCTTATGTGAGGAGCTTTCCTAGTGGAGTCAGAAACTGTTACAGAATAAACATAACCAGGGGTACCAAATATTTAATCCGAGCTACTTTCTATTATGGAAATTATGATGGTCTAAATCAGGTCCCACAGTTTGATATTCATCTTGGAGCTAATTTTTGGGACACAGTGAAGTTCCCCAATGCATCACGCACCACAATTAGTGAGATAATTCACACTCCATTATCACAAAATTACATACATCCATGTCTGGTCAACACAGGCGCAGGGACTCCATTCATTTCAGCTATAGAATTGAGGATTTTGAATAATATTACTTATAACACTAACACAACTGGATCATTGGCACGCCTCCAGAGACTCGATATTGGTTCCATTACCAACTCAGAATACAGGTACAGTGATGATGTTTATGACCGCTGGTGGGCACCTCTTACATTCAAACCGTGGACAAAGTTAAGCACCACACTTAACCCTGATGATCTTGCTCAGAATGAGTATAAACCACCAGCAGTTGTCATGAGCACTGCCGCTACACCAATAAATGCCAGTGCTCCTTTTGATTTCTCTTGGAAACCAGATAGTGTGACTGACCAACTCTACATCTACATGCATTTTAACGAGGTTGTAAAGCTTGCAGCAAATGAAACCAGAGAGTTCAATATCCTCATAAATGGCAATCGCTGGTATGGACCTCTGCTACCTTCATACCAAACAACAACTACTATATTTAGCCGATCAGCTTTGACTGGAGACACAAACTATCAATTTACGCTTTCTAAGACAGAGACTTCTACCCTTCCTCCCATCCTCAATGCCTTTGAGATTTATATAGTCAAAGATTTATCACAATCAGAAACTCAGCAAGATGATAGTAAGCTCTTTATCTCAACACATGCTAGCTTGCTTTTAATTGATGCTATCACAAAAATCAAGAATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGCCCCTGTTACATACATGTGGGAAGGCCTAAACTGTAGTTTTGATGGCAATAACCCCCCAAGAATTACATCCTTGGATTTGTCTTCAAATGGACTGACCGGGGAGATAACATCTTCCATCTCTAAGCTCACCATGTTACAATACTTGGATTTGTCAAACAATAACTTAAGCGGTCCTGTACCTGATTTTCTGGCACAAATGCAGTCTCTTAAAGTATTAAACTTGGGGAACAACAACCTTACAGGTGTAGTTCCGAGTAGGCTCCTTGATAGATCCAAAACAGGTTCACTTACATTGAGCGTGGAGCAAAATCCAAATCTATGTGAATCTGCTTCATGCAACCAACAAATGGATGATCAGAAGAAGAAGAAAAATAATATAGTTATTCCCGTTGTAGCATCACTTGCTGGGGTTGTGTTACTCCTAGTAATTGTTGCAGTAGCTATAATCTGTGGCCTTAAAAAAAGAAAACCACGAGCAATTGTGAACAGTCATATGGAGTCCAATACTCCAAATGTGTCAGTGTCACAACTGGAATCCAAGCAAAGACAATATACATTCGATGAACTTACTAAGATCACCAACAACTTTGATAAAATTCTTGGTAGAGGTGGATTTGGACCAGTTTATCATGGCTTGATTGATGACACTCAAGTAGCTGTCAAGATGCTTTCTCAATCAGCAGTTAAACTTCTCATGAGAGTTCATCATAAAAATCTGACTTCTCTTATTGGTTATTGCAATGAAGAAGCCAATATAGGGCTTATTTATGAATATATGGCAAATGGAAACCTTGATGAACATCTTTCAGGAAAAAATAGCAGGGCAAAGTTCTTCAGCTGGGAAGATAGACTCCGAATAGCACTGGATGCAGCCCAAGGACTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAAACTACAAATATCTTATTAAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGGCTATCCAAAACCTTTCCCACTGATGGAGGCACACATTTGTCCACTGTTGTTGCTGGAACTCCTGGTTACCTTGATCCTGAATTACATGAAGACTTTGAGACTAGCTCTGTGTGGAAAGCTGTTGAAATAGGAATGGCTTCTGTGTCCATCAATCCTGCCAGAAGGCCAAACATGAGTGATGTTGTGAACGAGTTAAAGGAGTGTTTGGCTACAGAGCTAGCTAGAAAAGGGTCGGGTCGTGACACTGAAAACAATGATTCAATTGAGTTGGTATCCTTAAATCTTACAACTGAACTCGGTCCCCTAGCTAGGTAG 2517 0.4017 MGIMSLHFRLLLLGFLTIVVLVQAQDQSGFISIDCGLPEKSSYTEPTTGINYISDTKFIDTGVSQSISPTEKASRQQQLAYVRSFPSGVRNCYRINITRGTKYLIRATFYYGNYDGLNQVPQFDIHLGANFWDTVKFPNASRTTISEIIHTPLSQNYIHPCLVNTGAGTPFISAIELRILNNITYNTNTTGSLARLQRLDIGSITNSEYRYSDDVYDRWWAPLTFKPWTKLSTTLNPDDLAQNEYKPPAVVMSTAATPINASAPFDFSWKPDSVTDQLYIYMHFNEVVKLAANETREFNILINGNRWYGPLLPSYQTTTTIFSRSALTGDTNYQFTLSKTETSTLPPILNAFEIYIVKDLSQSETQQDDSKLFISTHASLLLIDAITKIKNAYGVARNWQGDPCAPVTYMWEGLNCSFDGNNPPRITSLDLSSNGLTGEITSSISKLTMLQYLDLSNNNLSGPVPDFLAQMQSLKVLNLGNNNLTGVVPSRLLDRSKTGSLTLSVEQNPNLCESASCNQQMDDQKKKKNNIVIPVVASLAGVVLLLVIVAVAIICGLKKRKPRAIVNSHMESNTPNVSVSQLESKQRQYTFDELTKITNNFDKILGRGGFGPVYHGLIDDTQVAVKMLSQSAVKLLMRVHHKNLTSLIGYCNEEANIGLIYEYMANGNLDEHLSGKNSRAKFFSWEDRLRIALDAAQGLEYLHNGCKPPIIHRDVKTTNILLNENFQAKLADFGLSKTFPTDGGTHLSTVVAGTPGYLDPELHEDFETSSVWKAVEIGMASVSINPARRPNMSDVVNELKECLATELARKGSGRDTENNDSIELVSLNLTTELGPLAR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00018 838 PANTHER OS07G0107800 PROTEIN-RELATED 31 803 - -
Sebi122g00018 838 PRINTS Leucine-rich repeat signature 426 439 - -
Sebi122g00018 838 PRINTS Leucine-rich repeat signature 447 460 - -
Sebi122g00018 838 SUPERFAMILY L domain-like 398 494 - -
Sebi122g00018 838 Gene3D Phosphorylase Kinase; domain 1 580 663 - -
Sebi122g00018 838 Pfam Leucine rich repeat 424 484 IPR001611 GO:0005515
Sebi122g00018 838 FunFam Leucine-rich repeat receptor-like kinase 379 514 - -
Sebi122g00018 838 SMART serkin_6 599 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00018 838 Gene3D Transferase(Phosphotransferase) domain 1 664 769 - -
Sebi122g00018 838 Pfam Malectin-like domain 33 356 IPR024788 -
Sebi122g00018 838 Gene3D Ribonuclease Inhibitor 379 512 IPR032675 -
Sebi122g00018 838 SUPERFAMILY Protein kinase-like (PK-like) 574 799 IPR011009 -
Sebi122g00018 838 ProSiteProfiles Leucine-rich repeat profile. 473 494 IPR001611 GO:0005515
Sebi122g00018 838 Pfam Protein tyrosine and serine/threonine kinase 601 763 IPR001245 GO:0004672|GO:0006468
Sebi122g00018 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Sebi122g00018 838 ProSiteProfiles Protein kinase domain profile. 599 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00018 Sebi-Chr122 252951 257029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00018 8 838 Receptor kinase-like Gene Family AT1G51800 45.115 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi122g00018 Malectin_like 1.7e-115 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00018 - - aprc:113849011 1039.64