Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00017 ATGATGAGAATGTTGCATTTTCTTTTGGCATTATTGCTCGTGGTCCTTCGTATTGTGGTTCTGGTGCAAGCTCAGAATCCACCAGGATTCATTAGCATAGATTGTGGACTACCTGAAAATTCGAGCTATACGGAGCAGACCACAGGCATAAATTACATTTCAGATGCAAAATTCATAGATAGTGGTGTGAGCAAGAGTATATCACCAATAGATAAGGCTTCTCGTCAACAACAACTAGCTTATGTGAGAAGCTTTCCTAGTGGAGCCAGAAACTGTTACAGAATCAATGTAACCAGGGGTACCAAATATTTCATCCGAGCTACTTTCTATTATGGGAACTATGATGGTCTAAATCAGGCCCCAGAATTTGATCTTCATCTTGGACCTAATGTGTGGGGTACCGTAAAGTTCCCCAATGCATCACTAGCCGCATTCAGTGAGATCATTCACACTCCATCACAAAATCACATACGCCCTTGTTTGGTTAACACAGGCGCAGGGACTCCATTCATTTCAGCTATAGAATTGAGGATTTTGAATAATAATACTTATATAACTAACCCAACTGGATTAACGTTGGTATACCTTCGACGATTCGATATCGGTTCCATTACCAACAAAGAATACAGGTATAGTGATGATGTTTATGACCGATTGTGGATGCCTCTTACAATAAACTCGTGGACAAAACTAAGCACCTCACTTAACGCTGATGATGTAATTCAGAATGACTATAGACCACCAGCAGTTGTTTTGAGCACAGCTGCTACACCAGTAAATGCCAGTGATCTTTTTGATTTCTCTTGGAAACCAGATAGTGTGACTGACCAACTCTACTTCTACATGCACTTTAACGAGGTTGTAGAGCTCACACCAAATGTTGAAACCAGAGAGTTCAATATCCTCATAAATGGCAATCGTTGGTATGGACCTTTGAGACCTGCATACAAAATAGTAACTACCATATTTAGCCGAACAGCTTCATCTGGAGCCACAAGCTATCAGTTTACACTTTTACCGACAGGGAATTCTACCCTTCCACCCATCCTCAATGCTTTTGAGATTTATATAGCAAAAGATTTCTCACAATCAGAAACTCAACAAGATGATATTGATGCTATCACAAACATGAAGAATGTTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGCCCCTATAACATACATGTGGGAAGGACTAAACTGTAGTTTTGATGGAAATAACCCCCCAAGAATTACATCCTTGAATTTGTCTTCAAGTAATCTAACCGGGGAGATAGCATCTTCCATCTCTAAGCTAACTATGTTAGAGTACTTGGATTTGTCAAACAATAACTTAAGCGGCCCAGTACCTGATTTTCTGACACAAATGCAGTCACTAAAAGTCTTAAACTTGGGGAAGAACAACCTTACAGGTGTAGTTCCGAGTGGACTCCTTGATAGATCCAAAGCAGTTATTCCTGTAGTGGCATCAGTTGCTGGAATTGTGGTGCTCCTAGCAATTGTTGCAACAGCTGTAGTATGTGGCCTTAAAAAAAGGAAACCACGAGCGACTGTGAACAGTCATGTGGAGCCCAACACTCCAAATGTGTCACAATTGGAATCCAAGCAAAGACAATATACATTCAATGAACTTACTAAGATCACCAAAAACTTTGATACAATTCTTGGTAGAGGTGGTTTTGGAACAGTTTATCATGGCCTTATTGACGACACTCAAGTAGCTGTCAAGATGCTTTCTTCATCATCAGTTAAACTTCTTATGAGAGTCCATCACAAAAACCTGACTTCTCTAATTGGGTATTGCAATGAAGAAGCTAATATTGGGCTCATCTATGAATATATGGCAAATGGAAACCTGGATGGACATCTTTCAGGGAAAAATAGGAGGGCAAAGTTCTTAACTTGGGAAGACAGACTTCGAATAGCAGTGGATGCCGCCCAAGTTGTTCTTTTGGAGATAATCACAAGTCGACCAGCTATAACAAAAGGGCAAGAGAAGACTCACATAAGTCAGTGGGTTAGCTCCATGGTTTCAAATGGAGATATTAAAAATATTGTTGACTCAAGATTACATGAAGACTTTGAGACTAGCTCTGTTTGGAAAGCTGTTGAAATAGGAATGGCTTCTGTGTCTATCAATCCTGCCAGAAGGCCAAACACGAGTGAGATAGTGACTGAGTTAAAGGAGTGTTTGGCTATAGAGTTAGCTCGGAAAAGGTCGGGTCGTGACACTGAAAACAACGATTCAATTGAGTTGGGATCCTTGAATCTGACAACTGAAGTCGGTCCCCTGGCTAGGTAG 2310 0.4065 MMRMLHFLLALLLVVLRIVVLVQAQNPPGFISIDCGLPENSSYTEQTTGINYISDAKFIDSGVSKSISPIDKASRQQQLAYVRSFPSGARNCYRINVTRGTKYFIRATFYYGNYDGLNQAPEFDLHLGPNVWGTVKFPNASLAAFSEIIHTPSQNHIRPCLVNTGAGTPFISAIELRILNNNTYITNPTGLTLVYLRRFDIGSITNKEYRYSDDVYDRLWMPLTINSWTKLSTSLNADDVIQNDYRPPAVVLSTAATPVNASDLFDFSWKPDSVTDQLYFYMHFNEVVELTPNVETREFNILINGNRWYGPLRPAYKIVTTIFSRTASSGATSYQFTLLPTGNSTLPPILNAFEIYIAKDFSQSETQQDDIDAITNMKNVYGVARNWQGDPCAPITYMWEGLNCSFDGNNPPRITSLNLSSSNLTGEIASSISKLTMLEYLDLSNNNLSGPVPDFLTQMQSLKVLNLGKNNLTGVVPSGLLDRSKAVIPVVASVAGIVVLLAIVATAVVCGLKKRKPRATVNSHVEPNTPNVSQLESKQRQYTFNELTKITKNFDTILGRGGFGTVYHGLIDDTQVAVKMLSSSSVKLLMRVHHKNLTSLIGYCNEEANIGLIYEYMANGNLDGHLSGKNRRAKFLTWEDRLRIAVDAAQVVLLEIITSRPAITKGQEKTHISQWVSSMVSNGDIKNIVDSRLHEDFETSSVWKAVEIGMASVSINPARRPNTSEIVTELKECLAIELARKRSGRDTENNDSIELGSLNLTTEVGPLAR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00017 769 Gene3D Ribonuclease Inhibitor 371 487 IPR032675 -
Sebi122g00017 769 PANTHER OS07G0107800 PROTEIN-RELATED 31 650 - -
Sebi122g00017 769 Pfam Leucine rich repeat 412 472 IPR001611 GO:0005515
Sebi122g00017 769 FunFam Leucine-rich repeat receptor-like kinase 369 493 - -
Sebi122g00017 769 Pfam Malectin-like domain 33 356 IPR024788 -
Sebi122g00017 769 Pfam Protein tyrosine and serine/threonine kinase 554 650 IPR001245 GO:0004672|GO:0006468
Sebi122g00017 769 Gene3D Transferase(Phosphotransferase) domain 1 651 753 - -
Sebi122g00017 769 Gene3D Transferase(Phosphotransferase) domain 1 532 650 - -
Sebi122g00017 769 SUPERFAMILY Protein kinase-like (PK-like) 527 728 IPR011009 -
Sebi122g00017 769 SUPERFAMILY L domain-like 369 480 - -
Sebi122g00017 769 ProSiteProfiles Protein kinase domain profile. 552 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00017 769 ProSitePatterns Protein kinases ATP-binding region signature. 558 579 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00017 Sebi-Chr122 213607 218030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00017 651 769 Receptor kinase-like Gene Family AT2G19210 36.066 2.07e-15 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi122g00017 Malectin_like 1.7e-112 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00017 - - aprc:113849011 857.44