Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00011 ATGACGAGTATGATCGGATGTGGCGGTGTGACCCCAAATTACAATAAGAGTGGTTGGTATCCCTTGGAATTGAAAGAATCAAATAATGATAATGATGCTTATAAATTGCCATCCCAAGTATTGAGGACTGCAGCCACCTCCGCAACCAATTCATTGGATGTTCCCTACCCCTCCTTAGAATTTGACTATGACTCTGTGTTTGATAAGCCCCTTGACAGGCCTTTTGAGTATCATGTCTACTTCCACTTTGCCGAGATTCAGCAACTTCCAGATGGTCAAAAAAGAAGAATCAATATCACCCTTAACTCTAAATCCGTTCTCTCAAAGCCTTTGGTTCTTGAATACTTGAAGCCCGTTACTACTCTTAAGTACTCAACTCGAGGTTATGTTTGGTTTAGCATAAGCGCAACGTCAGAATCGGATGCTCCCCTATCCTCAACGCCTATGAGATCTATAAGGAACCTGAGTTCAAGCAATCTGGCGGGACAGATAACTACTTCATTCTCATATCTCACAGAACTAGAATTCCTGGATTTGTCATACAACGAGTTGGAAGGACCTCTTCCGGAATTTCTGGCAGAATTGCCAAACTTAAAGTCCTGGAACAAGCTTTCGGGTCCAATTCCTAAGGCTCTCAAGGAAAAGGCAGATACCACTTTGCAATTAAGTGTGGCTGATAATCCTGAACTTTTTGTGCGTTCTGATTCAAAGAAGGGGGATTCATTGAAATCAAAACTTCAAGCATTCAGTTACAATGAGATTCTCAACATTACTGATAACTTCAAAACTGTTATTGGAAAAGGTGGATTTGGAAAAGTTTACTTTGGCTTTCTACAACATCACACTCGAGTTGCTGTTAAGTTGCTTTCACGGTCATCAATGCAAGGTTATAAGGAATTCCGATCAGAGGCACAACTTCTAATGACTGCTCATCATAGAAATTTAGTCTCTCTAATTGGGTACTGCGATGAAGGTGAAATTAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCAACAACATTTATCAGCTGATTTTGGTCTAAGTAGAGCTTTCGGTAATGATATTGATTCTCATGTATCGACTCGCCCTGCTGGTACACTAGGTTATGTTGATCCAGAATTTCAGAGAACCGGAAACTCAAATAAGAAATGTGATATCTACAGCTTTGGGATAATTCTATTTGAGTTAATCACTGGCCAAAAAGCATTAGTAAGGGCACCTGGAAAAAACATAAACATGCACATACTTGAATGGGTTATTCCAATAGTTGAAAAAGGAGATATTCAAGACATTGTTGATCGGAGGTTGAAGGGAGAATTCAGTATAAATTCTGCATGGAAAGCTGTAGAGATTGCCATGTCATGCACTTCAACAACTGCAGTTGTAAGGCCAGACATCAGCCAAATACTGGTGGATCTAAAGGAATGTCTATCTTTAGAGATGGTTCAGAGAAATCGTGAAAGTGGAAGAACTACAATTGAATTGACTACTTCTGTGCAGATTGACTTGGAAACTGCTCCATTCGCTAGGTAG 1542 0.3988 MTSMIGCGGVTPNYNKSGWYPLELKESNNDNDAYKLPSQVLRTAATSATNSLDVPYPSLEFDYDSVFDKPLDRPFEYHVYFHFAEIQQLPDGQKRRINITLNSKSVLSKPLVLEYLKPVTTLKYSTRGYVWFSISATSESDAPLSSTPMRSIRNLSSSNLAGQITTSFSYLTELEFLDLSYNELEGPLPEFLAELPNLKSWNKLSGPIPKALKEKADTTLQLSVADNPELFVRSDSKKGDSLKSKLQAFSYNEILNITDNFKTVIGKGGFGKVYFGFLQHHTRVAVKLLSRSSMQGYKEFRSEAQLLMTAHHRNLVSLIGYCDEGEIKALIYEYMANGNLQQHLSADFGLSRAFGNDIDSHVSTRPAGTLGYVDPEFQRTGNSNKKCDIYSFGIILFELITGQKALVRAPGKNINMHILEWVIPIVEKGDIQDIVDRRLKGEFSINSAWKAVEIAMSCTSTTAVVRPDISQILVDLKECLSLEMVQRNRESGRTTIELTTSVQIDLETAPFAR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00011 513 Pfam Protein kinase domain 346 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00011 513 FunFam Leucine-rich repeat receptor-like protein kinase 237 334 - -
Sebi122g00011 513 SUPERFAMILY L domain-like 154 214 - -
Sebi122g00011 513 Gene3D Phosphorylase Kinase; domain 1 241 334 - -
Sebi122g00011 513 SUPERFAMILY Protein kinase-like (PK-like) 244 480 IPR011009 -
Sebi122g00011 513 Gene3D Ribonuclease Inhibitor 113 240 IPR032675 -
Sebi122g00011 513 Gene3D - 6 112 - -
Sebi122g00011 513 Pfam Protein tyrosine and serine/threonine kinase 261 345 IPR001245 GO:0004672|GO:0006468
Sebi122g00011 513 PANTHER OS07G0107800 PROTEIN-RELATED 146 480 - -
Sebi122g00011 513 Gene3D Transferase(Phosphotransferase) domain 1 344 507 - -
Sebi122g00011 513 Pfam Malectin-like domain 16 141 IPR024788 -
Sebi122g00011 513 ProSiteProfiles Protein kinase domain profile. 259 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00011 513 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00011 Sebi-Chr122 105617 109556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00011 144 513 Receptor kinase-like Gene Family AT1G07560 36.709 8.81e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi122g00011 Pkinase 3.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00011 - - aprc:113851010 439.499