Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00010 ATGTTACTTGCACAACATTTAGTTGGTGCTATGCTAGATATCAAAAGTGCCTACCAGATCTCCAGATTGAGTTGGCAAGGAGACCCCTGTCTTCCAAAGCAATATGCATGGGAGGGTCTCCTTTGCAGCTCTGACACCAGTCCAAGGATCATATCTTTGGATTTGTCAAACTACGAGTTGGAAGGACCTCTGCCGGAATTTCTGGCAGAATTGCCAAATAATCTAACAGGGAACAAGCTTTCTGGTCCAATTCCTAAGGCTCTCAAGGAAAAGGCAGATATAACATTGAAATTAAGTGTGGCTAACAATCCTGATCTTTGTATGACGGATTCATGCAAAAAGAAGAACATTGTCGTACCACTTGTTGCATCGCTTTCAGCTTTAATTGTAACCTCTTCATTTCTCTTGGATTTTGGATACTCAGAGGACAAAAAGGAGGATTTGGAAAAGTTTATTATGGCTTTCTACAAGATCACATTGAAGTTGCTGTTAAGTTGCTGTCACCATCATCAATGCAAGGTTATAAGGAATTTCGATCAGAGGTTAGAGATTTCATTCATGTTAGAACACGCACAACTTCTAATGACCGTTCATCATAGAAATTTGGTCTCTCTCATTGGGTACTGCGATGAAGATGAAACCAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCAACAACACTTATCAGGTACTAGTAGTAATTTATCTTTTGTCCACAAGGTGGAATGCAGATCTAGGTTCCTGAGAACTGGAAACTCAAATAAGAAAAGTGATATCTACAGCTTTGGTATAATTCTATTTGAGTTGATCACTGGCCAAGAGGCACTAGCAATAACATCTGGAAAAACCACTCACATACTTCAATGGGTTATTCCCATAGTTGAAAAAGGAGATATTCAAAACATTGTTGATCCGAGGTTGCAGGGGGAATTCAGTATCGATTCTGCATGGAAAGTTGTAGAGATTGCCATGTTGTGCACTTCACAAACAGCAGCTGAAAGGCTAGACATGAGCCAAATATTGGTAGAGTTAATGGAATATCTATCATTGGAGATGGTTCAGGGGAATAACGAAAGAGCAACTTCATTGCAGGTTGAATCAGAAATTGTTCCTTTAGCTACATATATAGCCACCTAA 1146 0.3935 MLLAQHLVGAMLDIKSAYQISRLSWQGDPCLPKQYAWEGLLCSSDTSPRIISLDLSNYELEGPLPEFLAELPNNLTGNKLSGPIPKALKEKADITLKLSVANNPDLCMTDSCKKKNIVVPLVASLSALIVTSSFLLDFGYSEDKKEDLEKFIMAFYKITLKLLLSCCHHHQCKVIRNFDQRLEISFMLEHAQLLMTVHHRNLVSLIGYCDEDETKALIYEYMANGNLQQHLSGTSSNLSFVHKVECRSRFLRTGNSNKKSDIYSFGIILFELITGQEALAITSGKTTHILQWVIPIVEKGDIQNIVDPRLQGEFSIDSAWKVVEIAMLCTSQTAAERLDMSQILVELMEYLSLEMVQGNNERATSLQVESEIVPLATYIAT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00010 381 Gene3D Ribonuclease Inhibitor 9 111 IPR032675 -
Sebi122g00010 381 SUPERFAMILY Protein kinase-like (PK-like) 172 347 IPR011009 -
Sebi122g00010 381 Gene3D Transferase(Phosphotransferase) domain 1 168 246 - -
Sebi122g00010 381 Gene3D Transferase(Phosphotransferase) domain 1 247 371 - -
Sebi122g00010 381 Pfam Protein tyrosine and serine/threonine kinase 173 245 IPR001245 GO:0004672|GO:0006468
Sebi122g00010 381 PANTHER OS07G0107800 PROTEIN-RELATED 8 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00010 Sebi-Chr122 93446 96571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00010 5 373 Receptor kinase-like Gene Family AT1G49100 30.485 1.79e-58 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi122g00010 PK_Tyr_Ser-Thr 9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00010 - - aprc:113851010 310.457