Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1225g00001 ATGAAATACCCAAAGGGTCAGACTGGAAACAAGAAGGGAGTACCCATGGCAAAAAGAAAAACCCACGCCAAAGGCCACGCAGGAGTAACACCATACCAAACAAATCAAGCAACCCTCAGAGCTATGTTAAAGGCAGCGAAAAATGGCATAATGCAAGACAAAAGCTTTCCAGAGACTCCACCTACCACCGAACCCATGAGTGAGTTGCCATTGATAAGTTTTCCAGGAACTCCACCTACCACAAAACCAATGAAAACTTCCAAAAATGACAGCGACAAAGAAGCGACCACCAAAGCAAGCCATTGGCTCCTACAAAATGAGGCATGTGCCACAACGAATGATCTGCCACTGTCATCATGGTGCAGGGAATGCGCCAAACAGGGAAACAATGAAAATTGCCGCTTCCAGTACTTTAGGGAGATAGAAGGGACTAAAGTCAGAGGATTCTGTACTTCAAACGGACCATCAGAGGCAAACAAGACAAAATGGCAAGCAGTCATTGAGAAAGAAGAGAAGAAAACATCATATGAGTACATAATCAAAAGAGTAAAAGACACTTTCCTAGAAATCGCTGATCAAGAAGAAAGGGTACTGACAAAAAATAAAGGCAACATTGTGCTATGGAAGAAACACATACCAGGAGTGCGCGAAATTTGTGACAGCTGTGCAACATCCCTCTTCAATTACCATTGGATCTGTCAGCAATGCGGTCTGGCTATATGCTTAGACTGCTATGAGGATACAGAACAACACCTCACAACTAGCGATACAGTACATGATGTCTGGATTGGAAACCCCCAATTTTTGTGCCTCAAAAATCCACTCCACCAAGATAACCTAGAATTATTTCAGCATCAATGGAAGAAAGGCGCTCCCATCCTTGTGGAGGGATTGGACAAAATCCTGGACATAACCCAGTGGCAGCCAAAGGCTTTTATGCAGGAATTTGGTGAAGAGATACATGAGCTAATTGATAACACAAGCAGTGATGATTTTGCCAAATTAATGCCGCAAAGGTTTGATGATCTCATGGATGCATTACCATTACCCCAATACACAAAGAGACAAGGGGAATTTAATTTGGCATCATATCTGCCAGATTCCTGGGTAAAACCTGACCTAGGCCCCAAAATGTACATCGCGTATGGGTCTGCTGAAAGTCCCAAAACAGGAACCACGAACCTGCATTTGGACATCAGTGATGCTGTTAACATCATGGTCTATGTGAAAATTCCCCACACAAGAGAGACCCTAAAACACCAAGAAGGAGTCAACAAAATTCTAACAGAAAATGAATGCAATGGCATGGTCACAGGAAAAACACCAGGAGCACTATGGCATATCTTTAATGCAAAGGATACAGCCAAAATACGACAGGTCCTAGACAAAGAGATATCCAGGAAAAAAGGGAAACAAACCACAAAATGTGACGCAATACATGATCAGAGTTGGTATCTGGACTCAGACCTGCTAGCTAAACTATACCTACAACATGGAGTGAAGCCATACACATTTGTCCAGTGCTTAGGAGACGCAGTTTTTATCCCAGCTGGTGCACCTCACCAGGTACAAAACTTAAACAATTGCATCAAAGTGGCAGAAGACTTTGTTTCACCAGAAAACGTAAACCAGTGTGTAAAATTGACCAGGGAGTTCAGCAAATTATCAAAGCAACACACCAACCATGAGGATAAGCTCCAAATTAAAAACATGATTTACCATGCCATGAACAATGCTACATCAATGGGCCACATTAGAGATGAATAA 1767 0.425 MKYPKGQTGNKKGVPMAKRKTHAKGHAGVTPYQTNQATLRAMLKAAKNGIMQDKSFPETPPTTEPMSELPLISFPGTPPTTKPMKTSKNDSDKEATTKASHWLLQNEACATTNDLPLSSWCRECAKQGNNENCRFQYFREIEGTKVRGFCTSNGPSEANKTKWQAVIEKEEKKTSYEYIIKRVKDTFLEIADQEERVLTKNKGNIVLWKKHIPGVREICDSCATSLFNYHWICQQCGLAICLDCYEDTEQHLTTSDTVHDVWIGNPQFLCLKNPLHQDNLELFQHQWKKGAPILVEGLDKILDITQWQPKAFMQEFGEEIHELIDNTSSDDFAKLMPQRFDDLMDALPLPQYTKRQGEFNLASYLPDSWVKPDLGPKMYIAYGSAESPKTGTTNLHLDISDAVNIMVYVKIPHTRETLKHQEGVNKILTENECNGMVTGKTPGALWHIFNAKDTAKIRQVLDKEISRKKGKQTTKCDAIHDQSWYLDSDLLAKLYLQHGVKPYTFVQCLGDAVFIPAGAPHQVQNLNNCIKVAEDFVSPENVNQCVKLTREFSKLSKQHTNHEDKLQIKNMIYHAMNNATSMGHIRDE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1225g00001 588 ProSiteProfiles JmjC domain profile. 354 553 IPR003347 -
Sebi1225g00001 588 SMART cupin_9 336 553 IPR003347 -
Sebi1225g00001 588 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 114 250 IPR045109 GO:0032454|GO:0033169
Sebi1225g00001 588 MobiDBLite consensus disorder prediction 57 96 - -
Sebi1225g00001 588 Gene3D Cupin 318 562 - -
Sebi1225g00001 588 Pfam JmjC domain, hydroxylase 444 536 IPR003347 -
Sebi1225g00001 588 MobiDBLite consensus disorder prediction 1 28 - -
Sebi1225g00001 588 SUPERFAMILY Clavaminate synthase-like 274 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1225g00001 Sebi-Chr1225 11570 14429 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sebi1225g00001 JmjC 1.6e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1225g00001 K15601 K11449 bfo:118414209 353.214