Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi121g00024 ATGGCTAGCCAACAATCTTTGTTAGACAAGCCCAGAAATTCCCTTTCCAAAACTTTCTGGTTAATCCTCTTTAGTTGCTATCATAAGCTCCTCAGCCCTTATTGCTTCTTATATCTTCAATCCCACCTCCTTCTTCAACCTCACCTCATTCCCCATGTCTGTGAGCATGCACTTGACACAAAATCCTGCTTAGCTCATGTCTCAGAGGTAGCACAAGGTCCAATCTTGGCCACCACAAAAGACCAAAAATTGAACTTACTTATATCTCTATTGACCAAATCCACACCACATATTCAAAATGCTATGGACACAGTCAAAGCTATCAAACACAGGATTAACAATCCCAAAGAGGAAGTAGCTTTGCACGACTGTGAGCAACTGATGGACTTGTCAATAGACAGAGTATGGGATTCAGTGGTGGCTCTAACAAAAAATACCATTGATTCTCAACAAGATGCACACTCATGGCTAAGCAGTGTGCTCACTAACCATGCAACTTGCTTGGATGGATTAGAAGGTCCATCACGGGCACTTATGGAGGCTGAGCTTGAGGACTTGATATCAAGAGCCAGAACTTCTCTGGCTATGCTTGTTGCTGTTTTGCCCCCAAAAGGTGAGCAATTCATTGATGAGTCACTAAATGGGGATTTTCCCTCGTGGGTGACAAGCAAGGATCGGAGGCTTCTAGAATCTTCTGTTAGGGACATAAAAGCTAATGTTGTGGTGGCTAAGGATGGGAGTGGAAAGTTCAAGACTGTGGCTGAGGCTATTGCATCGGCACCTGACAGTGGTAAGACAAGGTATGTGATCTATGTGAAAAAGGGAACTTACAAAGAGAATGTCGAAATTGGTAAGAAGAAGACGAATGTGATGCTCGTGGGTGATGGTATGGATGCAACTGTAATCACCGGCAGCTTGAATGTTATCGATGGATCTACCACCTTCAACAGTGCCACTGTTGGCCGCTGTGGGCGATGGATTTATAGCACAAGACATTTGGTTTCCAAAACACAGCAGGCCCACAGAAACACCAGCAGTGGCTCTTCGTTCGGTGCTGACCAATCCGTTATAAACCGGTCCCGTTGTTTTCCAGAAGTGCCAGCTGGTGGCCTCCGAAAGCCCATGAGTAACCAAAAAAACATGGTCACGCACGGCCCAAGGACAGAAGACCCAAACCAAAACACAGGAACTTCAATTCAGCAATGTAACTTAACACCAAGCTCAGATCTTCAAGAGCCCGTTGTTGGTTCCATCAAAACTTTTCTGGGCCGCCCATGGAAGAAGTACTCCAGAACAGTTGTGATGCAATCCTCCCTGGATAGCCATATTGACCCACAGGATGGGCAGAATGGGATGCCTCCAGTAAGGACTTTTTGCAAACGTTTGTATTATGGATAG 1398 0.4535 MASQQSLLDKPRNSLSKTFWLILFSCYHKLLSPYCFLYLQSHLLLQPHLIPHVCEHALDTKSCLAHVSEVAQGPILATTKDQKLNLLISLLTKSTPHIQNAMDTVKAIKHRINNPKEEVALHDCEQLMDLSIDRVWDSVVALTKNTIDSQQDAHSWLSSVLTNHATCLDGLEGPSRALMEAELEDLISRARTSLAMLVAVLPPKGEQFIDESLNGDFPSWVTSKDRRLLESSVRDIKANVVVAKDGSGKFKTVAEAIASAPDSGKTRYVIYVKKGTYKENVEIGKKKTNVMLVGDGMDATVITGSLNVIDGSTTFNSATVGRCGRWIYSTRHLVSKTQQAHRNTSSGSSFGADQSVINRSRCFPEVPAGGLRKPMSNQKNMVTHGPRTEDPNQNTGTSIQQCNLTPSSDLQEPVVGSIKTFLGRPWKKYSRTVVMQSSLDSHIDPQDGQNGMPPVRTFCKRLYYG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi121g00024 465 Gene3D - 214 352 IPR012334 -
Sebi121g00024 465 MobiDBLite consensus disorder prediction 366 406 - -
Sebi121g00024 465 Pfam Pectinesterase 239 360 IPR000070 GO:0030599|GO:0042545
Sebi121g00024 465 Pfam Pectinesterase 372 446 IPR000070 GO:0030599|GO:0042545
Sebi121g00024 465 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 200 IPR035513 -
Sebi121g00024 465 CDD PMEI-like_4 56 200 - -
Sebi121g00024 465 Gene3D - 353 460 IPR012334 -
Sebi121g00024 465 Pfam Plant invertase/pectin methylesterase inhibitor 49 188 IPR006501 GO:0004857
Sebi121g00024 465 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 196 IPR035513 -
Sebi121g00024 465 PANTHER PECTINESTERASE 371 465 - -
Sebi121g00024 465 FunFam Pectinesterase 3 51 200 - -
Sebi121g00024 465 SUPERFAMILY Pectin lyase-like 237 445 IPR011050 -
Sebi121g00024 465 NCBIfam pectinesterase inhibitor domain 46 176 IPR006501 GO:0004857
Sebi121g00024 465 MobiDBLite consensus disorder prediction 376 406 - -
Sebi121g00024 465 SMART PMEI_2 45 196 IPR006501 GO:0004857
Sebi121g00024 465 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi121g00024 Sebi-Chr121 1146723 1148854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi121g00024 3 465 Carbohydrate Esterase AT1G11580 41.618 5.70e-112 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi121g00024 K01051 - gmx:100815836 561.222