Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi121g00023 | ATGGACACAGTCAAAGCTATCAAACACAGGATTAACAATCCCAAAGAGGAAGTCGCTTTGCACGACTGTGAGCAACTAATGGACTTGTCAATAGACAGAGTATGGGATTCAGTGGTGGCTCTAACAAAAAATACCATTGATTCTCAACAAGATGCACACTCATGGCTAAGCAGTGTGCTCACTAACCATGCAACTTGTTTGGATGGATTAGAAGGTCCATCACGGGCACTTATGGAGGCTGAGCTTGAGGACTTGATGTCAAGAGCCAGAACTTCTCTGGCTATGCTTGTTGCTGTTTTGCCTCCAAAGGGTAATGAGCAATTCATTCATGAGTCATTAAATGGGGACTTTCCCTCATGGGTGACAAGCAAAGAACGAAGGCTTTTGGAGTCTTCGATTAGGGACATAAAGGCCAATGTTGTGGTGGCTAAGGATGGGAGTGGAAAGTTCAAGACTGTGGCTGAGGCTATTGCATCGGCACCCGACAATGGTAAGACAAGGTATGTGATCTATGTGAAAAAGGGAACTTACAAAGAGAACGTGGAAATTGGTAAGAAGAAAAAGAATGTGATGCTCGTGGGTGATGGTATGGATGCAACTGTAATCACCGGCAACTTGAATGTTATTGATGGATCTACCACCTTCAAAAGTGCCACTGTTGCTGCTGTGGGAGATGGATTTATAGCCCAAGACATTTGGTTCCAAAACACAGCAGGCCCACAAAAGCACCAGGCAGTGGCTCTCCGTGTTGGCGCCGACCAATCCGTTATAAACCGATGCCGTATGGACGCCTTCCAAGACACTCTCTACGCCCACTCCAACAGGCAGTTCTACCGTGACTCCTTCATTACCGGAACCGTTGACTTTATCTTCGGAAACGCAGCTGTTTGTTCCAGAAGTGCAAGCTGGTGGCCCGAAAGCCCATGA | 927 | 0.4671 | MDTVKAIKHRINNPKEEVALHDCEQLMDLSIDRVWDSVVALTKNTIDSQQDAHSWLSSVLTNHATCLDGLEGPSRALMEAELEDLMSRARTSLAMLVAVLPPKGNEQFIHESLNGDFPSWVTSKERRLLESSIRDIKANVVVAKDGSGKFKTVAEAIASAPDNGKTRYVIYVKKGTYKENVEIGKKKKNVMLVGDGMDATVITGNLNVIDGSTTFKSATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADQSVINRCRMDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVCSRSASWWPESP | 308 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi121g00023 | 308 | ProSitePatterns | Pectinesterase signature 2. | 283 | 292 | IPR033131 | - | |
Sebi121g00023 | 308 | FunFam | Putative pectinesterase 57 | 136 | 308 | - | - | |
Sebi121g00023 | 308 | Pfam | Pectinesterase | 139 | 299 | IPR000070 | GO:0030599|GO:0042545 | |
Sebi121g00023 | 308 | Pfam | Plant invertase/pectin methylesterase inhibitor | 9 | 94 | IPR006501 | GO:0004857 | |
Sebi121g00023 | 308 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 1 | 99 | IPR035513 | - | |
Sebi121g00023 | 308 | ProSitePatterns | Pectinesterase signature 1. | 164 | 183 | IPR018040 | - | |
Sebi121g00023 | 308 | CDD | PMEI-like_4 | 1 | 99 | - | - | |
Sebi121g00023 | 308 | PANTHER | PECTINESTERASE | 8 | 297 | - | - | |
Sebi121g00023 | 308 | SUPERFAMILY | Pectin lyase-like | 137 | 297 | IPR011050 | - | |
Sebi121g00023 | 308 | Gene3D | - | 133 | 301 | IPR012334 | - | |
Sebi121g00023 | 308 | NCBIfam | pectinesterase inhibitor domain | 4 | 75 | IPR006501 | GO:0004857 | |
Sebi121g00023 | 308 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 5 | 95 | IPR035513 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi121g00023 | Sebi-Chr121 | 1127650 | 1129071 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi121g00023 | 1 | 296 | Carbohydrate Esterase | AT1G11580 | 61.386 | 4.67e-129 | 378 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi121g00023 | K01051 | - | gmx:100815836 | 503.442 |