Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi121g00023 ATGGACACAGTCAAAGCTATCAAACACAGGATTAACAATCCCAAAGAGGAAGTCGCTTTGCACGACTGTGAGCAACTAATGGACTTGTCAATAGACAGAGTATGGGATTCAGTGGTGGCTCTAACAAAAAATACCATTGATTCTCAACAAGATGCACACTCATGGCTAAGCAGTGTGCTCACTAACCATGCAACTTGTTTGGATGGATTAGAAGGTCCATCACGGGCACTTATGGAGGCTGAGCTTGAGGACTTGATGTCAAGAGCCAGAACTTCTCTGGCTATGCTTGTTGCTGTTTTGCCTCCAAAGGGTAATGAGCAATTCATTCATGAGTCATTAAATGGGGACTTTCCCTCATGGGTGACAAGCAAAGAACGAAGGCTTTTGGAGTCTTCGATTAGGGACATAAAGGCCAATGTTGTGGTGGCTAAGGATGGGAGTGGAAAGTTCAAGACTGTGGCTGAGGCTATTGCATCGGCACCCGACAATGGTAAGACAAGGTATGTGATCTATGTGAAAAAGGGAACTTACAAAGAGAACGTGGAAATTGGTAAGAAGAAAAAGAATGTGATGCTCGTGGGTGATGGTATGGATGCAACTGTAATCACCGGCAACTTGAATGTTATTGATGGATCTACCACCTTCAAAAGTGCCACTGTTGCTGCTGTGGGAGATGGATTTATAGCCCAAGACATTTGGTTCCAAAACACAGCAGGCCCACAAAAGCACCAGGCAGTGGCTCTCCGTGTTGGCGCCGACCAATCCGTTATAAACCGATGCCGTATGGACGCCTTCCAAGACACTCTCTACGCCCACTCCAACAGGCAGTTCTACCGTGACTCCTTCATTACCGGAACCGTTGACTTTATCTTCGGAAACGCAGCTGTTTGTTCCAGAAGTGCAAGCTGGTGGCCCGAAAGCCCATGA 927 0.4671 MDTVKAIKHRINNPKEEVALHDCEQLMDLSIDRVWDSVVALTKNTIDSQQDAHSWLSSVLTNHATCLDGLEGPSRALMEAELEDLMSRARTSLAMLVAVLPPKGNEQFIHESLNGDFPSWVTSKERRLLESSIRDIKANVVVAKDGSGKFKTVAEAIASAPDNGKTRYVIYVKKGTYKENVEIGKKKKNVMLVGDGMDATVITGNLNVIDGSTTFKSATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADQSVINRCRMDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVCSRSASWWPESP 308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi121g00023 308 ProSitePatterns Pectinesterase signature 2. 283 292 IPR033131 -
Sebi121g00023 308 FunFam Putative pectinesterase 57 136 308 - -
Sebi121g00023 308 Pfam Pectinesterase 139 299 IPR000070 GO:0030599|GO:0042545
Sebi121g00023 308 Pfam Plant invertase/pectin methylesterase inhibitor 9 94 IPR006501 GO:0004857
Sebi121g00023 308 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 99 IPR035513 -
Sebi121g00023 308 ProSitePatterns Pectinesterase signature 1. 164 183 IPR018040 -
Sebi121g00023 308 CDD PMEI-like_4 1 99 - -
Sebi121g00023 308 PANTHER PECTINESTERASE 8 297 - -
Sebi121g00023 308 SUPERFAMILY Pectin lyase-like 137 297 IPR011050 -
Sebi121g00023 308 Gene3D - 133 301 IPR012334 -
Sebi121g00023 308 NCBIfam pectinesterase inhibitor domain 4 75 IPR006501 GO:0004857
Sebi121g00023 308 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 5 95 IPR035513 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi121g00023 Sebi-Chr121 1127650 1129071 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi121g00023 1 296 Carbohydrate Esterase AT1G11580 61.386 4.67e-129 378
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi121g00023 K01051 - gmx:100815836 503.442