Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi121g00021 | ATGGATGGGGATCAGAAAAGTACAGCTATGGTTAGCCAGGAAAAGAAGAGCCAGGGTGGGTCTATTTGGTCCATTTTCATGCATGCTGATGGCCAAGATTGGTTTCTTATGGTTTTAGGTTTCTTTGGGGCTATTGGTGAAGGCTTGACAACCCCTTTGGTGTTGTATATCAGTAGCCGTATGATGAATAATATTGGGAGTTCATCTACCATGTCAGCAAACACTTTCATCCATAACATCAATAAGAATGCAGTGGCTTGGTTATATTTGGCTGGTGCCTCTTTTATTGTCTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGGAAGACAAGCTGCTAGAATGAGATGCAGGTATCTGAAAGCAGTGCTAAGACAAGAAGTTGCTTACTTTGATTTGCATGTCACAAGTACGTCAGAGATCATCACTAGTGTCTCCAATGACAGTCTCATAATTCAAGATGTTCTTAGTGAGAAGGTTCCAAATTTCTTGATGAACTTGTCTTTGTTCATTGGGAGCTACATAGCAGCTTTTGCATTCTTGTGGAGATTGGCCATTGTGGGGTTTCCATTTTTGGTTCTTCTAGTGATCCCTGGTTTTATTTATGGCAAGACTTTGATGGGGTTGGCTAGCAAGATCAGAGAAGAGTATAATCAAGCTGGTACAATAGCAGAACAAACAATATCTTCCATCAGAACCGTCTATTCATTTGTTGGGGAAAGCAAGTCCATGATTGCTTTCTCTGATGCTCTACAAGGAACAGTTAAGTTGGGGCTAAAACAAGGCTTAGCTAAAGGCCTAGCTATTGGAAGCAACGGTCTTGTCTTTGCTATATGGTCTTTCATGTGCTATTATGGTAGTAAACTGGTCATGTACCATGGAGCTAAAGGAGGGACAATTTTTGCTGTTGGAGCAGCCATAACTGTTGGATTAGGTGCTGGATTATCCAACATGAAGTATTTCTCTGAAGCATGTTCTGCTGGGGAACGTATCAAGGAAGTGATAAAAAGAGTTCCAAAGATTGATTCTGACAAAATGGATGGGGAGATTTTAGATAACGTTTATGGGGAAGTGGAATTTGACCACATAGAATTTGCATACCCATCAAGACCAGAAAGTGTTATCCTCAATGACTTGTGCCTCAAGATTCCAGCAGGGAAGACAGTGGCATTGGTGGGAGAGAGTGGCTCAGGGAAATCTACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGGGGGTGAAATACGTCTTGATGGGGTGGCTATTCATAAGTTGAAGCTCAAGTGGATGAGGTCACAGATGGGGTTAGTGAGCCAAGAGCCTGCTCTGTTCGCAACCAGCATTAAAGAGAACATACTTTTTGGTAAGGAGGATGCAACAGAGGATGAGATAGTTGAGGCTGCAAAAACTTGCAATGCTCATAATTTCATTTCACAGCTTCCTCAGGGTTACCATACACAGGTTGGGGAGAGAGGGATTCAAATGTCAGGGGGACAAAAACAGAGGATAGCAATTGCGCGGGCAATAATCAAGAAACCGCGAATCCTTCTTCTCGACGAAGCAACCAGCGCATTGGATTCCGAATCCGAACGACTCGTCCAAGAAGCACTCGACAATGCAGTTTCCTCTTGCACCGCCATCATCGTCGCTCACCGCTTATCCACCATCCGAAACGCCGACCTCATCGCCGTCATGCGCGGCGGAAAGGTGACGGAGATTGGCTCACACGACGACCTCATCCAAAACGACAATGGCCTCTACGCCTCCCTCGTTCGCCTCCAACAAAACGACAAATCCAAAACACAACCAGAAACCGTTACCACCACCACCAGTACTGCTGTCCCTTCCTCGCTGTCCATCACCGACACTCCAAACATGGGCCTGGTGGGCCCTTCCAATTCAGTTGGGGATGATCATCATAACATTGAAGACGACAATAAGCCGATGCATGCGGCGTCGTTTCGGAGACTGATGGCAATGAACCTTCCAGAATGGAAGCATGCTGTTTTCGGGTGTTTAAACGCAATGCTATTTGGTGCCGTTCAGCCTGTTTATGCATTCGCAATGGGGTCCATGATATTTGTCTATTTTCATACAGATCATGAGGAGATTAGAAGAAAGACAAGGGTCTATTCTTTATGCTTTTTGGGCCTCTCCGTGATCTCCTTGCTAGTTAATGTTGGCCAGCACTATAGCTTTGGTTACATGGGAGAGTACTTGACTAAAAGGGTCAGAGAGAGCGTGCTTTCCAAGATACTCACTTTTGAAATTGGGTGGTTTGATCAGGACCAAAACTCCAGTGGTGCTATTTGTTCCAGAATTGCCAATGACGCTAATGTGGTGAGGTCTTTAGTGGGAGATAGAATGGCTCTGCTGGTACAAACTTTCTCAGCGGTGATAACAGCCTACACAATGGGCCTGGTCATTTCATGGAGGCTTACTATTGTTATGATAGCTGTTCAACCCATTATCGTAGCCTGCTTTTACACAAGGCGTGTGCTTCTCAAGAGCATGTCTAGCAAGGCCATCAAAGCCCAAGAACAAAGCAGCAAGCTAGCTGCTGAAGCTGTTTCTAATCTTCGAACCATCACTGCCTTTTCATCTCAAGATCGAATTCTCAAAATGCTTGAAAAAGCCCAAGAAAGCCCAATTCATGAGAATATTCGACAATCCTGGTTCGCTGGCATTGGGCTCGGGTTTTCCCAGTTCCTCACGTCTTGTACTTGGGCCTTAGACTTTTGGTACGGTGGCAGGCTTATCTCAAATGGCTACATCACAACAAAAGCAATGTTTGAGAGCTTCATGGTTGTGGTGAGCACTGGACGGGTCATTGCAGATGCTGGAAGCATGACCACAGACCTTGCCAAAGGTTCCGATGTTGTGGACTCGGTTTTTGCTATCCTAGATAGGTGCACGAAAATTGAGCCCGATGACCCGAATGGGCTGAAGCCTGAGAATTTAATGGGCCAAATAGAACTCCATGATGTGCATTTTGCATACCCAGCTAGGCCCAATGCGGTTATCTTCCGAGGGTTCTCAATTAAAATAGAAGCGGGGAAATCAACAGCATTGGTGGGACAAAGTGGGTCTGGCAAATCAACCATCATAGGGCTAATAGAGAGATTCTATGACCCAGTGAAAGGAGTAGTGACAATAGATGGTAGGGACATAAAATCATATAACCTTAAGTCACTAAGAAAGCACATAGCACTTGTGAGCCAAGAGCCAACACTGATTGGTGGGACCATAAGAGAGAACATTACCTATGGAACGTGTGACAAGATTGATGAGGCTGAGATAATAGAAGCAGCAAAAATAGCCAATGCTCATGATTTCATATGTAGGTTGAAAGATGGTTACGAGACATGGTGTGGGGACAAAGGGGTACAACTTTCAGGGGGGCAAAAGCAGAGGATAGCAATAGCGAGGGCCATATTGAAAAATCCGAAGGTGTTGCTACTAGACGAGGCCACAAGCGCACTAGATAGCCAGTCAGAGAGGGTGGTGCAAGATGCACTGAATAGGGTAATGGTGGGAAGGACCAGTGTGGTTGTGGCACACAGGTTGAGCACCATACACAATTGTGATCTTATTGCTGTGTTAGATAAAGGGAGGATGGTGGAGATTGGAACCCACTCATCTTTGTTGGCCAAAGGACCATGTGGAGCTTATTACTCTTTGGTATGTCTCCAAAGGAGACATGCAGCCACAACCAATGACAATTCTACGTACTAA | 3744 | 0.4506 | MDGDQKSTAMVSQEKKSQGGSIWSIFMHADGQDWFLMVLGFFGAIGEGLTTPLVLYISSRMMNNIGSSSTMSANTFIHNINKNAVAWLYLAGASFIVCFLEGYCWTRTSGRQAARMRCRYLKAVLRQEVAYFDLHVTSTSEIITSVSNDSLIIQDVLSEKVPNFLMNLSLFIGSYIAAFAFLWRLAIVGFPFLVLLVIPGFIYGKTLMGLASKIREEYNQAGTIAEQTISSIRTVYSFVGESKSMIAFSDALQGTVKLGLKQGLAKGLAIGSNGLVFAIWSFMCYYGSKLVMYHGAKGGTIFAVGAAITVGLGAGLSNMKYFSEACSAGERIKEVIKRVPKIDSDKMDGEILDNVYGEVEFDHIEFAYPSRPESVILNDLCLKIPAGKTVALVGESGSGKSTVISLLQRFYDPLGGEIRLDGVAIHKLKLKWMRSQMGLVSQEPALFATSIKENILFGKEDATEDEIVEAAKTCNAHNFISQLPQGYHTQVGERGIQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNAVSSCTAIIVAHRLSTIRNADLIAVMRGGKVTEIGSHDDLIQNDNGLYASLVRLQQNDKSKTQPETVTTTTSTAVPSSLSITDTPNMGLVGPSNSVGDDHHNIEDDNKPMHAASFRRLMAMNLPEWKHAVFGCLNAMLFGAVQPVYAFAMGSMIFVYFHTDHEEIRRKTRVYSLCFLGLSVISLLVNVGQHYSFGYMGEYLTKRVRESVLSKILTFEIGWFDQDQNSSGAICSRIANDANVVRSLVGDRMALLVQTFSAVITAYTMGLVISWRLTIVMIAVQPIIVACFYTRRVLLKSMSSKAIKAQEQSSKLAAEAVSNLRTITAFSSQDRILKMLEKAQESPIHENIRQSWFAGIGLGFSQFLTSCTWALDFWYGGRLISNGYITTKAMFESFMVVVSTGRVIADAGSMTTDLAKGSDVVDSVFAILDRCTKIEPDDPNGLKPENLMGQIELHDVHFAYPARPNAVIFRGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPVKGVVTIDGRDIKSYNLKSLRKHIALVSQEPTLIGGTIRENITYGTCDKIDEAEIIEAAKIANAHDFICRLKDGYETWCGDKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDSQSERVVQDALNRVMVGRTSVVVAHRLSTIHNCDLIAVLDKGRMVEIGTHSSLLAKGPCGAYYSLVCLQRRHAATTNDNSTY | 1247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi121g00021 | 1247 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 38 | 314 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi121g00021 | 1247 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 359 | 595 | IPR003439 | GO:0005524 | |
Sebi121g00021 | 1247 | Gene3D | ABC transporter type 1, transmembrane domain | 24 | 961 | IPR036640 | GO:0005524|GO:0016020 | |
Sebi121g00021 | 1247 | ProSitePatterns | ABC transporters family signature. | 498 | 512 | IPR017871 | GO:0005524|GO:0016887 | |
Sebi121g00021 | 1247 | CDD | ABC_MTABC3_MDL1_MDL2 | 994 | 1234 | - | - | |
Sebi121g00021 | 1247 | CDD | ABC_MTABC3_MDL1_MDL2 | 359 | 597 | - | - | |
Sebi121g00021 | 1247 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 37 | 332 | - | - | |
Sebi121g00021 | 1247 | MobiDBLite | consensus disorder prediction | 600 | 620 | - | - | |
Sebi121g00021 | 1247 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 678 | 959 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi121g00021 | 1247 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 661 | 977 | - | - | |
Sebi121g00021 | 1247 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 994 | 1231 | IPR003439 | GO:0005524 | |
Sebi121g00021 | 1247 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 983 | 1234 | IPR027417 | - | |
Sebi121g00021 | 1247 | Pfam | ABC transporter | 377 | 526 | IPR003439 | GO:0005524 | |
Sebi121g00021 | 1247 | SUPERFAMILY | ABC transporter transmembrane region | 658 | 979 | IPR036640 | GO:0005524|GO:0016020 | |
Sebi121g00021 | 1247 | FunFam | ABC transporter B family member 1 | 24 | 356 | - | - | |
Sebi121g00021 | 1247 | FunFam | ABC transporter B family member 4 | 984 | 1241 | - | - | |
Sebi121g00021 | 1247 | PANTHER | ABC TRANSPORTER B FAMILY | 12 | 730 | IPR039421 | - | |
Sebi121g00021 | 1247 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 352 | 597 | IPR027417 | - | |
Sebi121g00021 | 1247 | ProSitePatterns | ABC transporters family signature. | 1134 | 1148 | IPR017871 | GO:0005524|GO:0016887 | |
Sebi121g00021 | 1247 | Pfam | ABC transporter | 1014 | 1162 | IPR003439 | GO:0005524 | |
Sebi121g00021 | 1247 | Gene3D | - | 349 | 598 | IPR027417 | - | |
Sebi121g00021 | 1247 | Pfam | ABC transporter transmembrane region | 37 | 304 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi121g00021 | 1247 | Pfam | ABC transporter transmembrane region | 674 | 942 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi121g00021 | 1247 | Gene3D | - | 984 | 1245 | IPR027417 | - | |
Sebi121g00021 | 1247 | SMART | AAA_5 | 386 | 572 | IPR003593 | GO:0016887 | |
Sebi121g00021 | 1247 | SMART | AAA_5 | 1021 | 1216 | IPR003593 | GO:0016887 | |
Sebi121g00021 | 1247 | FunFam | Putative ABC transporter B family member 8 | 637 | 982 | - | - | |
Sebi121g00021 | 1247 | FunFam | ABC transporter B family member 4 | 349 | 605 | - | - | |
Sebi121g00021 | 1247 | SUPERFAMILY | ABC transporter transmembrane region | 32 | 509 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi121g00021 | Sebi-Chr121 | 623483 | 630705 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi121g00021 | 674 | 1245 | Calmodulin-binding Proteins | AT2G36910 | 36.678 | 2.91e-112 | 380 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi121g00021 | K05658 | - | gmx:100809399 | 1910.58 |