Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi121g00021 ATGGATGGGGATCAGAAAAGTACAGCTATGGTTAGCCAGGAAAAGAAGAGCCAGGGTGGGTCTATTTGGTCCATTTTCATGCATGCTGATGGCCAAGATTGGTTTCTTATGGTTTTAGGTTTCTTTGGGGCTATTGGTGAAGGCTTGACAACCCCTTTGGTGTTGTATATCAGTAGCCGTATGATGAATAATATTGGGAGTTCATCTACCATGTCAGCAAACACTTTCATCCATAACATCAATAAGAATGCAGTGGCTTGGTTATATTTGGCTGGTGCCTCTTTTATTGTCTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGGAAGACAAGCTGCTAGAATGAGATGCAGGTATCTGAAAGCAGTGCTAAGACAAGAAGTTGCTTACTTTGATTTGCATGTCACAAGTACGTCAGAGATCATCACTAGTGTCTCCAATGACAGTCTCATAATTCAAGATGTTCTTAGTGAGAAGGTTCCAAATTTCTTGATGAACTTGTCTTTGTTCATTGGGAGCTACATAGCAGCTTTTGCATTCTTGTGGAGATTGGCCATTGTGGGGTTTCCATTTTTGGTTCTTCTAGTGATCCCTGGTTTTATTTATGGCAAGACTTTGATGGGGTTGGCTAGCAAGATCAGAGAAGAGTATAATCAAGCTGGTACAATAGCAGAACAAACAATATCTTCCATCAGAACCGTCTATTCATTTGTTGGGGAAAGCAAGTCCATGATTGCTTTCTCTGATGCTCTACAAGGAACAGTTAAGTTGGGGCTAAAACAAGGCTTAGCTAAAGGCCTAGCTATTGGAAGCAACGGTCTTGTCTTTGCTATATGGTCTTTCATGTGCTATTATGGTAGTAAACTGGTCATGTACCATGGAGCTAAAGGAGGGACAATTTTTGCTGTTGGAGCAGCCATAACTGTTGGATTAGGTGCTGGATTATCCAACATGAAGTATTTCTCTGAAGCATGTTCTGCTGGGGAACGTATCAAGGAAGTGATAAAAAGAGTTCCAAAGATTGATTCTGACAAAATGGATGGGGAGATTTTAGATAACGTTTATGGGGAAGTGGAATTTGACCACATAGAATTTGCATACCCATCAAGACCAGAAAGTGTTATCCTCAATGACTTGTGCCTCAAGATTCCAGCAGGGAAGACAGTGGCATTGGTGGGAGAGAGTGGCTCAGGGAAATCTACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGGGGGTGAAATACGTCTTGATGGGGTGGCTATTCATAAGTTGAAGCTCAAGTGGATGAGGTCACAGATGGGGTTAGTGAGCCAAGAGCCTGCTCTGTTCGCAACCAGCATTAAAGAGAACATACTTTTTGGTAAGGAGGATGCAACAGAGGATGAGATAGTTGAGGCTGCAAAAACTTGCAATGCTCATAATTTCATTTCACAGCTTCCTCAGGGTTACCATACACAGGTTGGGGAGAGAGGGATTCAAATGTCAGGGGGACAAAAACAGAGGATAGCAATTGCGCGGGCAATAATCAAGAAACCGCGAATCCTTCTTCTCGACGAAGCAACCAGCGCATTGGATTCCGAATCCGAACGACTCGTCCAAGAAGCACTCGACAATGCAGTTTCCTCTTGCACCGCCATCATCGTCGCTCACCGCTTATCCACCATCCGAAACGCCGACCTCATCGCCGTCATGCGCGGCGGAAAGGTGACGGAGATTGGCTCACACGACGACCTCATCCAAAACGACAATGGCCTCTACGCCTCCCTCGTTCGCCTCCAACAAAACGACAAATCCAAAACACAACCAGAAACCGTTACCACCACCACCAGTACTGCTGTCCCTTCCTCGCTGTCCATCACCGACACTCCAAACATGGGCCTGGTGGGCCCTTCCAATTCAGTTGGGGATGATCATCATAACATTGAAGACGACAATAAGCCGATGCATGCGGCGTCGTTTCGGAGACTGATGGCAATGAACCTTCCAGAATGGAAGCATGCTGTTTTCGGGTGTTTAAACGCAATGCTATTTGGTGCCGTTCAGCCTGTTTATGCATTCGCAATGGGGTCCATGATATTTGTCTATTTTCATACAGATCATGAGGAGATTAGAAGAAAGACAAGGGTCTATTCTTTATGCTTTTTGGGCCTCTCCGTGATCTCCTTGCTAGTTAATGTTGGCCAGCACTATAGCTTTGGTTACATGGGAGAGTACTTGACTAAAAGGGTCAGAGAGAGCGTGCTTTCCAAGATACTCACTTTTGAAATTGGGTGGTTTGATCAGGACCAAAACTCCAGTGGTGCTATTTGTTCCAGAATTGCCAATGACGCTAATGTGGTGAGGTCTTTAGTGGGAGATAGAATGGCTCTGCTGGTACAAACTTTCTCAGCGGTGATAACAGCCTACACAATGGGCCTGGTCATTTCATGGAGGCTTACTATTGTTATGATAGCTGTTCAACCCATTATCGTAGCCTGCTTTTACACAAGGCGTGTGCTTCTCAAGAGCATGTCTAGCAAGGCCATCAAAGCCCAAGAACAAAGCAGCAAGCTAGCTGCTGAAGCTGTTTCTAATCTTCGAACCATCACTGCCTTTTCATCTCAAGATCGAATTCTCAAAATGCTTGAAAAAGCCCAAGAAAGCCCAATTCATGAGAATATTCGACAATCCTGGTTCGCTGGCATTGGGCTCGGGTTTTCCCAGTTCCTCACGTCTTGTACTTGGGCCTTAGACTTTTGGTACGGTGGCAGGCTTATCTCAAATGGCTACATCACAACAAAAGCAATGTTTGAGAGCTTCATGGTTGTGGTGAGCACTGGACGGGTCATTGCAGATGCTGGAAGCATGACCACAGACCTTGCCAAAGGTTCCGATGTTGTGGACTCGGTTTTTGCTATCCTAGATAGGTGCACGAAAATTGAGCCCGATGACCCGAATGGGCTGAAGCCTGAGAATTTAATGGGCCAAATAGAACTCCATGATGTGCATTTTGCATACCCAGCTAGGCCCAATGCGGTTATCTTCCGAGGGTTCTCAATTAAAATAGAAGCGGGGAAATCAACAGCATTGGTGGGACAAAGTGGGTCTGGCAAATCAACCATCATAGGGCTAATAGAGAGATTCTATGACCCAGTGAAAGGAGTAGTGACAATAGATGGTAGGGACATAAAATCATATAACCTTAAGTCACTAAGAAAGCACATAGCACTTGTGAGCCAAGAGCCAACACTGATTGGTGGGACCATAAGAGAGAACATTACCTATGGAACGTGTGACAAGATTGATGAGGCTGAGATAATAGAAGCAGCAAAAATAGCCAATGCTCATGATTTCATATGTAGGTTGAAAGATGGTTACGAGACATGGTGTGGGGACAAAGGGGTACAACTTTCAGGGGGGCAAAAGCAGAGGATAGCAATAGCGAGGGCCATATTGAAAAATCCGAAGGTGTTGCTACTAGACGAGGCCACAAGCGCACTAGATAGCCAGTCAGAGAGGGTGGTGCAAGATGCACTGAATAGGGTAATGGTGGGAAGGACCAGTGTGGTTGTGGCACACAGGTTGAGCACCATACACAATTGTGATCTTATTGCTGTGTTAGATAAAGGGAGGATGGTGGAGATTGGAACCCACTCATCTTTGTTGGCCAAAGGACCATGTGGAGCTTATTACTCTTTGGTATGTCTCCAAAGGAGACATGCAGCCACAACCAATGACAATTCTACGTACTAA 3744 0.4506 MDGDQKSTAMVSQEKKSQGGSIWSIFMHADGQDWFLMVLGFFGAIGEGLTTPLVLYISSRMMNNIGSSSTMSANTFIHNINKNAVAWLYLAGASFIVCFLEGYCWTRTSGRQAARMRCRYLKAVLRQEVAYFDLHVTSTSEIITSVSNDSLIIQDVLSEKVPNFLMNLSLFIGSYIAAFAFLWRLAIVGFPFLVLLVIPGFIYGKTLMGLASKIREEYNQAGTIAEQTISSIRTVYSFVGESKSMIAFSDALQGTVKLGLKQGLAKGLAIGSNGLVFAIWSFMCYYGSKLVMYHGAKGGTIFAVGAAITVGLGAGLSNMKYFSEACSAGERIKEVIKRVPKIDSDKMDGEILDNVYGEVEFDHIEFAYPSRPESVILNDLCLKIPAGKTVALVGESGSGKSTVISLLQRFYDPLGGEIRLDGVAIHKLKLKWMRSQMGLVSQEPALFATSIKENILFGKEDATEDEIVEAAKTCNAHNFISQLPQGYHTQVGERGIQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNAVSSCTAIIVAHRLSTIRNADLIAVMRGGKVTEIGSHDDLIQNDNGLYASLVRLQQNDKSKTQPETVTTTTSTAVPSSLSITDTPNMGLVGPSNSVGDDHHNIEDDNKPMHAASFRRLMAMNLPEWKHAVFGCLNAMLFGAVQPVYAFAMGSMIFVYFHTDHEEIRRKTRVYSLCFLGLSVISLLVNVGQHYSFGYMGEYLTKRVRESVLSKILTFEIGWFDQDQNSSGAICSRIANDANVVRSLVGDRMALLVQTFSAVITAYTMGLVISWRLTIVMIAVQPIIVACFYTRRVLLKSMSSKAIKAQEQSSKLAAEAVSNLRTITAFSSQDRILKMLEKAQESPIHENIRQSWFAGIGLGFSQFLTSCTWALDFWYGGRLISNGYITTKAMFESFMVVVSTGRVIADAGSMTTDLAKGSDVVDSVFAILDRCTKIEPDDPNGLKPENLMGQIELHDVHFAYPARPNAVIFRGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPVKGVVTIDGRDIKSYNLKSLRKHIALVSQEPTLIGGTIRENITYGTCDKIDEAEIIEAAKIANAHDFICRLKDGYETWCGDKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDSQSERVVQDALNRVMVGRTSVVVAHRLSTIHNCDLIAVLDKGRMVEIGTHSSLLAKGPCGAYYSLVCLQRRHAATTNDNSTY 1247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi121g00021 1247 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 314 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi121g00021 1247 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 359 595 IPR003439 GO:0005524
Sebi121g00021 1247 Gene3D ABC transporter type 1, transmembrane domain 24 961 IPR036640 GO:0005524|GO:0016020
Sebi121g00021 1247 ProSitePatterns ABC transporters family signature. 498 512 IPR017871 GO:0005524|GO:0016887
Sebi121g00021 1247 CDD ABC_MTABC3_MDL1_MDL2 994 1234 - -
Sebi121g00021 1247 CDD ABC_MTABC3_MDL1_MDL2 359 597 - -
Sebi121g00021 1247 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 332 - -
Sebi121g00021 1247 MobiDBLite consensus disorder prediction 600 620 - -
Sebi121g00021 1247 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 678 959 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi121g00021 1247 CDD ABC_6TM_Pgp_ABCB1_D2_like 661 977 - -
Sebi121g00021 1247 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 994 1231 IPR003439 GO:0005524
Sebi121g00021 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 983 1234 IPR027417 -
Sebi121g00021 1247 Pfam ABC transporter 377 526 IPR003439 GO:0005524
Sebi121g00021 1247 SUPERFAMILY ABC transporter transmembrane region 658 979 IPR036640 GO:0005524|GO:0016020
Sebi121g00021 1247 FunFam ABC transporter B family member 1 24 356 - -
Sebi121g00021 1247 FunFam ABC transporter B family member 4 984 1241 - -
Sebi121g00021 1247 PANTHER ABC TRANSPORTER B FAMILY 12 730 IPR039421 -
Sebi121g00021 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 597 IPR027417 -
Sebi121g00021 1247 ProSitePatterns ABC transporters family signature. 1134 1148 IPR017871 GO:0005524|GO:0016887
Sebi121g00021 1247 Pfam ABC transporter 1014 1162 IPR003439 GO:0005524
Sebi121g00021 1247 Gene3D - 349 598 IPR027417 -
Sebi121g00021 1247 Pfam ABC transporter transmembrane region 37 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi121g00021 1247 Pfam ABC transporter transmembrane region 674 942 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi121g00021 1247 Gene3D - 984 1245 IPR027417 -
Sebi121g00021 1247 SMART AAA_5 386 572 IPR003593 GO:0016887
Sebi121g00021 1247 SMART AAA_5 1021 1216 IPR003593 GO:0016887
Sebi121g00021 1247 FunFam Putative ABC transporter B family member 8 637 982 - -
Sebi121g00021 1247 FunFam ABC transporter B family member 4 349 605 - -
Sebi121g00021 1247 SUPERFAMILY ABC transporter transmembrane region 32 509 IPR036640 GO:0005524|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi121g00021 Sebi-Chr121 623483 630705 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi121g00021 674 1245 Calmodulin-binding Proteins AT2G36910 36.678 2.91e-112 380
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi121g00021 K05658 - gmx:100809399 1910.58