Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi121g00009 ATGGAAGGAACTTGTATTACTATTTTGTTGTATCAGAAGGTAAACCATCTAAGGACCCAGTGGTTCTATGGCTTAACGGCGGACCGGGGTGCTCTAGCCTCTATGGCTTTGTATATGAGCATGGTTTCCAACATTATATATTTGGATTCTCCTGCTGGAGTGGGGTTTTCATACTCAAAGAATAAATCTGATTACATAACTGGAGATGTAAAGACTGCTTCTGATACACATACTTTCCTCCTTAAGTGGTTTGAACTATACCCTGAGTTCCTTCCCAACCCATTATTCATTTCTGGAGAGTCGTATGCTGGAATTTATGTACCTACTCTTGCTCAGAAAATAGTGGAAGGTATTGAAGCTGGTAAAAAGCCCAGTCTGAATTTCAAGGGTTACATGATTGGAAATGCTTATACGGATGACGAATTTGATGGTACGAAGGCCTTATTTCCATTTGCACATGGGATGGGTCTTATCAGTGATGATTTGTTTGAGGAGTTCACAGAAAAATGCAAGGGGAAATATGATCCAAGTACCCCAGAGTGCTCAAAACTTTTGTCAAAAGTTATGAAGGTACTTGAAGGATTAAACGACTATGACATTCTAGAACCATGTTATCATGATGATGGGGTGGAGAATCAAAAACCCCATTCTGTGTTGCCATTCAGCTTTAGACAGTTGCATGAGAGTTTCGACCCAAAAAAGTTGCATGAGAGTGATTGGCCTCTACCTATGAGAAAAATAATGTATGGTCATGCTTGGCCCCTCAAAAAAGCTCTTGTAAAAGATGGAAGAGTATCAACTTGGCCACAACTGAGCAAGTTAGTTCCGTGCGAGGATGATGAGGTTGCAACCTCATGGCTAAACAATCACGAGGTCAGGAGAGCAATTTACACTGTAGAGGAAAGTGTGGTCATTAGGTGGCAGTTATGTACACTAAAAATTTATTACGTTTCTGATATTGGAAGCGCGATTGAGTACCACAAGAACCTAACTTCCAAAGGATATCGAGCACTTATATACAGTGGTGATCATGACATGATTATCCCATTTCCTGGAACTAAAGCATGGATGAGATCAATTGGATATAAGATTGTTGATGAATGGAGGCCTTGGTTTGTTAATGATCAAGTTGCTGGGTTTACACAAGGATATGACAAAAATCTTACTTTTCTCACTATAAAGGGAGCTGGGCATGCTGTTCCACAATATAAACCACAAGAGTCATTGAATTTTTACAAGCGGTTTTTGACTGGATTGCCAATATAA 1266 0.3981 MEGTCITILLYQKVNHLRTQWFYGLTADRGALASMALYMSMVSNIIYLDSPAGVGFSYSKNKSDYITGDVKTASDTHTFLLKWFELYPEFLPNPLFISGESYAGIYVPTLAQKIVEGIEAGKKPSLNFKGYMIGNAYTDDEFDGTKALFPFAHGMGLISDDLFEEFTEKCKGKYDPSTPECSKLLSKVMKVLEGLNDYDILEPCYHDDGVENQKPHSVLPFSFRQLHESFDPKKLHESDWPLPMRKIMYGHAWPLKKALVKDGRVSTWPQLSKLVPCEDDEVATSWLNNHEVRRAIYTVEESVVIRWQLCTLKIYYVSDIGSAIEYHKNLTSKGYRALIYSGDHDMIIPFPGTKAWMRSIGYKIVDEWRPWFVNDQVAGFTQGYDKNLTFLTIKGAGHAVPQYKPQESLNFYKRFLTGLPI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi121g00009 421 ProSitePatterns Serine carboxypeptidases, serine active site. 97 104 IPR018202 GO:0004185
Sebi121g00009 421 ProSitePatterns Serine carboxypeptidases, histidine active site. 388 405 IPR033124 GO:0004185
Sebi121g00009 421 PRINTS Carboxypeptidase C serine protease (S10) family signature 48 58 IPR001563 GO:0004185|GO:0006508
Sebi121g00009 421 PRINTS Carboxypeptidase C serine protease (S10) family signature 83 108 IPR001563 GO:0004185|GO:0006508
Sebi121g00009 421 PRINTS Carboxypeptidase C serine protease (S10) family signature 388 401 IPR001563 GO:0004185|GO:0006508
Sebi121g00009 421 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 405 IPR001563 GO:0004185|GO:0006508
Sebi121g00009 421 SUPERFAMILY alpha/beta-Hydrolases 42 420 IPR029058 -
Sebi121g00009 421 FunFam Carboxypeptidase 323 418 - -
Sebi121g00009 421 Gene3D alpha/beta hydrolase 38 419 IPR029058 -
Sebi121g00009 421 Pfam Serine carboxypeptidase 42 417 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi121g00009 Sebi-Chr121 161856 169868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi121g00009 282 421 Calmodulin-binding Proteins AT2G22960 45.714 1.27e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi121g00009 K16296 - jre:108989165 513.457