Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1215g00001 ATGTTCAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTATAACGTCCAGAGATTTAATCGACAAGCTCTTAACACTCCTCCAAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGATTGACATCTGCACAAGAAAGCCCCATGGCCTCAAACAAGGATTGGACACCGAGGAGTCACTACAAACCCTCTGTGAACAGAGGATTTTACCCCTCTGAACCGTTGGATCACGGTGGTGGCCACCAGTTCCATGCAGGGTCGTCTATGGAGCCATCAAGGTCAACCACCGCTTCTAGGGATGAGCCTTCTATTAGCAATGCCAGTGAAATGGAGTCAGAATGGGTAGAGCAAGATGAGCCTGGAGTTTACATCACAATCAGACAGTTAGCTGATGGGACAAGGGAGCTAAGACGTGTCAGATTCAGCCGGGAGAGATTTGGGGAG 471 0.4713 MFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEQRDSSYSRLTSAQESPMASNKDWTPRSHYKPSVNRGFYPSEPLDHGGGHQFHAGSSMEPSRSTTASRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1215g00001 157 MobiDBLite consensus disorder prediction 96 120 - -
Sebi1215g00001 157 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 157 IPR044532 -
Sebi1215g00001 157 MobiDBLite consensus disorder prediction 47 68 - -
Sebi1215g00001 157 ProSiteProfiles BRX domain profile. 1 23 IPR013591 -
Sebi1215g00001 157 Pfam Transcription factor regulating root and shoot growth via Pin3 1 22 IPR013591 -
Sebi1215g00001 157 Pfam Transcription factor regulating root and shoot growth via Pin3 120 157 IPR013591 -
Sebi1215g00001 157 ProSiteProfiles BRX domain profile. 121 157 IPR013591 -
Sebi1215g00001 157 MobiDBLite consensus disorder prediction 30 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1215g00001 Sebi-Chr1215 8177 9191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1215g00001 1 157 Major Intrinsic Protein MIP AT1G31880 66.460 4.16e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1215g00001 - - gmx:100785003 278.485