Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1214g00003 ATGGGTATTATATCGACCTTGTTGTTCATCCTTCTCCCTTTTGTCCTGTCTCCACAGCTTTCATATTCAGCTATAGATACTATGCTTCAAGGTTCATCCCTCTCAGTGGAGGAACCAGAAGATGTCATGGTCTCACCAAATGGCATGTTCACTGCTGGCTTCTATGCTGTTGGTGAAAATGCCTATTCCTTTGCCATTTGGTTTTCAGAGCCACCCTTTGGCCAAACCCAAAACCCCACTGTTGTATGGATGGCAAACCGTGACCACCCAGTCAACGGAAAGGGCTCAGAGCTTTCCCTCCTTCACAGTGGCAACCTTGTCTTAAACGACGCTGATGAATCCAATGTTTGGTCGACAAACACTGTTTCATTGTCCTCTGTCCAACTGCTACTTTACGACACCGGTAACCTTGTTCTACGTGAAGCAAGTGGTGATGGTGTCATCTTGTGGCAGAGCTTTGATTTTCCTACAGATACCCTTCTTCCTCAACAAGTCTTCACCAGATTTACAAAACTAGTCTCTTCAAGAAGCGAGACAAACAAGTCCTCAGGTTTCTATACCCTGTTTTTCGAAAACGACAATATTCTTCGTCTTGTATATGATGGTCCTGAAGTGTCAGGATTTTATTGGCCAGATCCTTTGCTTGTAAGTTGGGAGGCTAATAGAGACGGTTACAACAACACCAGAGTTGCGGTTTTGGACACCCTGGGAAACTTTATTTCATCAGATAATTTCACTTTTATAACATCTGATTATGGTACTGTCATCCAAAGAAGATTTACCATTGATCATGATGGAAATCTTCGTGTTTACAGTCGGAATCACCAAGGAGAGAAATGGTTTATTTCTTGGCAAACTGAATTAGAACCATGCCGTATTCATGGCATTTGTGGCCCTAACAGTTTGTGTTCTTATAATCGTAACTCTGGTGTGAAATGCTCTTGCCTTCCAGGCTATAAGATGAAGAATGATGGCGATTGGTCTTATGGATGTGAACCCAAATTCTCTCTCTCTTGCAACAAAACTGAGTCTAGCTTTTTATATATAAGTAATGTGAACTTATATGGCTATGACTATACTATTATGAAAAATTACACGCTCAATCAGTGTAAGGAGTTATGCTTGCAACTTTGTAACTGTAAAGCCATCCAGTATACCTATGTCACTGGTACAGGCACTTTTTCTTGTTACCCAAAGTTGCAGTTGCAGAATGGGTATCGTGTGCCGTATTTCAATGCTCATCTGTATTTGAGACTGCCAGCAAACAGTTCATATTCTCTTGAGGAGTCCATAGATGAGTACAGTCTTGCTTGTTCCGCTAATCCCAAAACAATACAGCTTGAAAGAGCATATAACAAAGGCAATGAAAACAGGAATGTTAAGTTCCTGCTCTGGTTTGCAGGGGGATTGGGAGGACTTGAAATTTTGTGCATTTTTCTTGTTTGGTACTTTTTGGTAAGAACCAGGCAACAATATTCTGGTGCAGGCTCACGAGGCTATAATCTAGCCTTGGGTGGATTTAGGAAATTCAGTTATTCTGAATTGAAACAAGCTACCAAAGGTTTTAGTGAAGAGATTGGAAGGGGTACAGGAGGGATTGTATACAAAGGTGTATTGTCTGATCAACGAGTTGCAGCAATAAAGAGACTCAAGGAAGCTAATCAAGGAGAAGAAGATTTCCTCGCAGAGGTAAGTATCATTGGAAGGCTTAACCATATGAATTTGATTGAGATGTGGGGGTACTGTGCTGAGGGAAAACATAGGCTATTGGTGTATGAGTACATGGAGCATGGTTCTCTTGCAGAAAATATCAAGTCTAGTAGATTGGATTGGGCAACAAGGTTTAACATAGCCTTAGGTACAGCAAAAGGTCTTGCTTATATCCATGAGGAGTGCTTGGAGTGGATTCTTCACTGTGATGTAAAGCCTCAGAACATACTTCTGGATTCTGATTATCAGCCAAAGGTTGCAGATTTTGGGCAGTCCAAGCTGCGGAACAGAAATGATACTAAATACTCTAGTTTTTCAAGGATACGAGGAACTAGAGGTTATTTGGCTCCTGAATGGGTTTTTAATCTACCAATAACCTCCAAAGTTGACGTTTATAGCTATGGAATTGTTATATTGGAAATGATCACTGGAAAAAATGTAACAAGGGATATTGATATCATTGATGGAGTAGAGAAGCAACATCTCAGCATGGTTGCATGGCTGAGAGAGAAACAGAATAAGGGATCTGTGTGGGTTAATGAAATCTTAGACCCCACGGTAGAAGGAAGTCATGATGAAAATCAGATGGAAGCTTTGGCTAGAGTGGCTCTGCAATGTGTAGAGGAAGAGAAGGACAAGAGACCCACCATGAGCCAAGTAGTAGAAATGCTTCAGAAATCTAGCCATGGAAATGATAATCTGTGA 2415 0.4112 MGIISTLLFILLPFVLSPQLSYSAIDTMLQGSSLSVEEPEDVMVSPNGMFTAGFYAVGENAYSFAIWFSEPPFGQTQNPTVVWMANRDHPVNGKGSELSLLHSGNLVLNDADESNVWSTNTVSLSSVQLLLYDTGNLVLREASGDGVILWQSFDFPTDTLLPQQVFTRFTKLVSSRSETNKSSGFYTLFFENDNILRLVYDGPEVSGFYWPDPLLVSWEANRDGYNNTRVAVLDTLGNFISSDNFTFITSDYGTVIQRRFTIDHDGNLRVYSRNHQGEKWFISWQTELEPCRIHGICGPNSLCSYNRNSGVKCSCLPGYKMKNDGDWSYGCEPKFSLSCNKTESSFLYISNVNLYGYDYTIMKNYTLNQCKELCLQLCNCKAIQYTYVTGTGTFSCYPKLQLQNGYRVPYFNAHLYLRLPANSSYSLEESIDEYSLACSANPKTIQLERAYNKGNENRNVKFLLWFAGGLGGLEILCIFLVWYFLVRTRQQYSGAGSRGYNLALGGFRKFSYSELKQATKGFSEEIGRGTGGIVYKGVLSDQRVAAIKRLKEANQGEEDFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEHGSLAENIKSSRLDWATRFNIALGTAKGLAYIHEECLEWILHCDVKPQNILLDSDYQPKVADFGQSKLRNRNDTKYSSFSRIRGTRGYLAPEWVFNLPITSKVDVYSYGIVILEMITGKNVTRDIDIIDGVEKQHLSMVAWLREKQNKGSVWVNEILDPTVEGSHDENQMEALARVALQCVEEEKDKRPTMSQVVEMLQKSSHGNDNL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1214g00003 804 FunFam S-receptor-like serine/threonine-protein kinase 489 594 - -
Sebi1214g00003 804 CDD B_lectin 44 156 IPR001480 -
Sebi1214g00003 804 CDD EGF 290 319 - -
Sebi1214g00003 804 Gene3D Transferase(Phosphotransferase) domain 1 595 803 - -
Sebi1214g00003 804 SMART ntp_6 341 419 IPR003609 -
Sebi1214g00003 804 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Sebi1214g00003 804 Pfam D-mannose binding lectin 80 167 IPR001480 -
Sebi1214g00003 804 Pfam PAN-like domain 339 396 IPR003609 -
Sebi1214g00003 804 SUPERFAMILY Protein kinase-like (PK-like) 502 795 IPR011009 -
Sebi1214g00003 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 211 IPR036426 -
Sebi1214g00003 804 Pfam S-locus glycoprotein domain 244 322 IPR000858 GO:0048544
Sebi1214g00003 804 CDD PAN_AP_plant 335 420 - -
Sebi1214g00003 804 Pfam Protein kinase domain 523 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1214g00003 804 Gene3D - 158 288 IPR036426 -
Sebi1214g00003 804 Gene3D Phosphorylase Kinase; domain 1 490 594 - -
Sebi1214g00003 804 ProSiteProfiles Protein kinase domain profile. 520 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1214g00003 804 FunFam Putative receptor protein kinase ZmPK1 22 155 - -
Sebi1214g00003 804 PANTHER OS07G0415500 PROTEIN 3 796 - -
Sebi1214g00003 804 Gene3D - 20 154 IPR036426 -
Sebi1214g00003 804 ProSiteProfiles PAN/Apple domain profile. 339 415 IPR003609 -
Sebi1214g00003 804 SMART blect_4 31 156 IPR001480 -
Sebi1214g00003 804 PIRSF SRK 1 803 IPR024171 GO:0004674
Sebi1214g00003 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 803 - -
Sebi1214g00003 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Sebi1214g00003 804 CDD STKc_IRAK 526 796 - -
Sebi1214g00003 804 SMART serkin_6 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1214g00003 804 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Sebi1214g00003 804 ProSiteProfiles Bulb-type lectin domain profile. 25 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1214g00003 Sebi-Chr1214 29600 32014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1214g00003 506 794 Receptor kinase-like Gene Family AT3G58690 40.199 9.99e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi1214g00003 Pkinase 5.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1214g00003 - - gmx:100792388 1217.22