Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi120g00054 ATGGCTTCAAATTCGCAAAAGGATATTCCTGCTGATGACAAAGCTGGTTCAGCAGAGAATAAAAATTCCAAAGATGAAACATCCTCTAAAGATTCACCAGCAGGACAAAGAACTGCTCCTGGACCTGCAACTGGGTTGCCACCAAACCCTTTTGATTTCTCAGCCATGTCTGGTCTGCTCAATGATCCTAGTATCAAGGAATTGGCTGAACAAATAGCAAAAGATCCGTCATTCAATCAGATGGCTGATCAGCTTCAGAAAACTTTTCAAGGAGTAACACAGGATGGTGTCCCTAACTTTGATAATCAGCAATATTTTTCAACCATGCAACAGGTCATGCAGAATCCTAATTTTATGACCATGGCTGAGCGCCTGGGTAATGCATTGATGCAGGATCCATCTATGTCTTCCATGCTTGAAAGTTTTACTAATCCATCAAATAAAGATCAGCTTGAAGAGAGAATGTCACGCATCAAGGAAGATCCATCTTTGAAACATATTTTGGATGAGATAGAGACTGGTGGTCCTGCTGCTATGATGAGGTACTGGAATGACGAGGAGGTTTTGCGGAAGTTGGGTCAAGCAATGGGCCTTGCAAATGCTGGAGAAGCAGCTGCTTCTGCTGAAAATTCTGGGCCAGATGAGACAGAAGAGTATGGAAATGAAGATGAATCAATTGTTCATCACACTGCTAGTGTTGGTGATGTGGAGGTACTATGGTGTTTTCCTTTTGATCCCTGCACCCTCTGGCTTCAGGGCTTGAAAAATGCACTAGCATCTGGTGCTGACAAGGATGAAGAAGATTCAGAAGGAAGAACTGCCTTGCATTTTGCCTGTGGATATGGCGAGGTATGCTACTATCCAGAGGAGATAGGAGTGGAGACAGGAAAATGTGATGTGAAGTGTGCACAAGTTCTCCTTGAGGCTGGTGCAAAAGTAGATGCTTTGGATAAGAATAAGAACACAGCTCTTCATTATGCAGCTGGTTATGGCAGGAAGGAATGTGTGGCCTTGCTCCTTGAAAACGGTGCTGCAGTCACCCTCCAGAATATGGACGGGAAAACTCCTATAGATGTTGCAAAGCTAAACAATCAAAATGATGTCCTAAAGCTGCTTGAGAAAGATGCTTTCCTGTAG 1137 0.4354 MASNSQKDIPADDKAGSAENKNSKDETSSKDSPAGQRTAPGPATGLPPNPFDFSAMSGLLNDPSIKELAEQIAKDPSFNQMADQLQKTFQGVTQDGVPNFDNQQYFSTMQQVMQNPNFMTMAERLGNALMQDPSMSSMLESFTNPSNKDQLEERMSRIKEDPSLKHILDEIETGGPAAMMRYWNDEEVLRKLGQAMGLANAGEAAASAENSGPDETEEYGNEDESIVHHTASVGDVEVLWCFPFDPCTLWLQGLKNALASGADKDEEDSEGRTALHFACGYGEVCYYPEEIGVETGKCDVKCAQVLLEAGAKVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNNQNDVLKLLEKDAFL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi120g00054 378 MobiDBLite consensus disorder prediction 202 221 - -
Sebi120g00054 378 Pfam STI1 domain 154 197 IPR041243 -
Sebi120g00054 378 Gene3D - 250 378 IPR036770 -
Sebi120g00054 378 Pfam Ankyrin repeats (many copies) 306 360 IPR002110 GO:0005515
Sebi120g00054 378 SUPERFAMILY Ankyrin repeat 226 373 IPR036770 -
Sebi120g00054 378 SMART ANK_2a 270 315 IPR002110 GO:0005515
Sebi120g00054 378 SMART ANK_2a 319 348 IPR002110 GO:0005515
Sebi120g00054 378 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 72 374 - -
Sebi120g00054 378 ProSiteProfiles Ankyrin repeat profile. 270 318 IPR002110 GO:0005515
Sebi120g00054 378 MobiDBLite consensus disorder prediction 1 58 - -
Sebi120g00054 378 ProSiteProfiles Ankyrin repeat profile. 319 351 IPR002110 GO:0005515
Sebi120g00054 378 FunFam Ankyrin repeat domain-containing protein 2 324 375 - -
Sebi120g00054 378 ProSiteProfiles Ankyrin repeat region circular profile. 319 350 - -
Sebi120g00054 378 MobiDBLite consensus disorder prediction 12 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi120g00054 Sebi-Chr120 1322865 1330736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi120g00054 299 374 MAP Kinase Kinase Kinase AT3G58760 42.105 3.67e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi120g00054 - - gmx:100797622 596.275