Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi120g00007 ATGGATACCTCTGCCAATACATGTGAGATAGTGGAATCAAGGGATGAGATAATTTCTGAGTTCAAAACAAATGAAAAACCAGAGAGTAGTTGTTCCCACAGATCAGGAAAAAAGTATTCAATTGAGGATGATATCAATCGCCTTTTCCAGGCTATTGAGATTAAGAGTTCATCTAGAGGTCTTAGTACATCACGATCACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCAGTTCATCTCAGGCATCAGGAATTGGCATCTCAGAGCCTGTAAGTTTGAAGCAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCGGAAATGGCTGCTTTGAAGAGACAATCAAAGCCATGCAGTTCTTCAAGAGCATCAGAGGCTGGGACCATCAAAAAGTTGTACACAGCAGTGGTAGATGAGGGGAAAGGGAACTTGGTGGAAATCTCCCTAGTGCCAGAGATATCTGCAGCTTCTGATAAATTGCCTGGTGTAGCAATATCAAGTTCAAGTGCTAATCATTCTATTCCTTTGGTTAATACAACAAACTCAAAAGATATAACAACCAGGTTTGCTTCCCGAGATCAGATTGTTCCTCTTCCACCTGAGGTTGAGAGTGACAAACCAACAGTAGGACCTATACTTGCAAATTTGTCATCAGTTATTTCTGGAAGTGAAGAAGTGCCAGAGGTCAGAATGAATCCTGCTTCCTCAAGTAAAGCTTCTCCCAGTTCTTCAATGCTAGATAAGGGACAGGAAGCAAATTTACATTCTGCATCTTGTCCATCTAGCTCTAGCACTGGTAATGGAGTGGATAAACCCACAAGCAGTAATGCATGTTTGGCAAAGCCAATATTCAATAACATGAACTTCCTTAAGAAAAAGGTAAAGCAAGATCTATGTTCTACCTCCAGCTGCTCTACTCCATGTATGAGAAATGATATGGGTTCTAGTACAAGTAATTTGGACAAGGAGACTGGCAATTCTGATTTGAAGCATGAAGTTAAAGAAAATGATAAACCATCTCCCAGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTAGTACAGATTCAAGCAAACCTGGTTTCAGTTTGAATTGCAATAAGAGAACTAAGTTTCTAGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGTGAGTTCTCCCAAAGCTCAAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGTGAGGAGAGCAATCTAAGTGGTTCTAGTCGCAGTGGCCACAGACCTCACATGTCAAAACACTTGAGATGGGAAGCAATCCGTGCTGTTCAACAGCAGCATGAACTAATTGGTACAAGCTGCCTTTTTGCACTGAAAGTGATGGACAACGAATTTTTGGCAAGCAGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAGATCCTTCAAATGCTGGATCATCCATTTCTTCCTACACTTTATTCCCATATCACAACAGATAAGCTCTCTTGCTTGGTTATGGAATATTGTCCAGGTGGGGATCTGCATGTGTTGCGACAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTCGCCCTTGAGTATTTGCACATGCTGGGAGTTGTATATCGAGATCTAAAGCCAGAAAATATCCTAGTGCGCGAAGATGGCCACATTATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTCAATCCAATGTTAGTCAAGTCATCTTCACCTGACACGGATGCAACAAAGAAGATGTCCAGTCCCTGTTCAGATGCTAGCTGCATACACCCTTTCTGTCTCCAACCGGATTGGCAAGTCTCCTGCTTTACTCCTATTCTATTATCTGCTGGAGCAAAATCTCGAAAGATGAAGGCTGATATAGGTGCTCAAGTTGGTCCATTGCCACAGCTTGTAGTCGAGCCTACCAGTGCACGGTCTAACTCCTTCGTTGGAACTTATGAATATCTTGCTCCAGAGATAATCAAAGGTGAGGGTCATGGGAATGCTGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGGAAGACTCCCTTCAAGGGTCCATCAAATGAGGATACATTAGCTAATGTTGTGTCACAGAGCCTTAAGTTCCCAGGTGCTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAAATCGTTTAGGTTCTGTAAAAGGTGCAGCTGAAATAAAACAGCATCCTTTCTTTGAAGGCCTAAACTGGGCTCTAATACGGTGTGCAGCACCACCAGAGCTCCCCAAGTTTCGTGACTTTGGAAATAGTTCTCTATCTATGGCTGCACAGAAGGAGAATGCAAATGATTTAGAGGATACAGAAGATTGTGAAGAGTTCGAGCTGTTTTAG 2433 0.4159 MDTSANTCEIVESRDEIISEFKTNEKPESSCSHRSGKKYSIEDDINRLFQAIEIKSSSRGLSTSRSQKSALKRPIKVSSSQASGIGISEPVSLKQALRGLCISQASEMAALKRQSKPCSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISAASDKLPGVAISSSSANHSIPLVNTTNSKDITTRFASRDQIVPLPPEVESDKPTVGPILANLSSVISGSEEVPEVRMNPASSSKASPSSSMLDKGQEANLHSASCPSSSSTGNGVDKPTSSNACLAKPIFNNMNFLKKKVKQDLCSTSSCSTPCMRNDMGSSTSNLDKETGNSDLKHEVKENDKPSPSSSNHSIEVNSINVSTDSSKPGFSLNCNKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESNLSGSSRSGHRPHMSKHLRWEAIRAVQQQHELIGTSCLFALKVMDNEFLASRKKMFRAQTEREILQMLDHPFLPTLYSHITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDTDATKKMSSPCSDASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKADIGAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGNAVDWWTFGIFLFELLYGKTPFKGPSNEDTLANVVSQSLKFPGAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGNSSLSMAAQKENANDLEDTEDCEEFELF 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi120g00007 810 MobiDBLite consensus disorder prediction 392 421 - -
Sebi120g00007 810 Pfam Protein kinase domain 656 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi120g00007 810 Pfam Protein kinase domain 447 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi120g00007 810 PANTHER FLIPPASE KINASE 1-RELATED 443 778 - -
Sebi120g00007 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Sebi120g00007 810 Gene3D Phosphorylase Kinase; domain 1 446 504 - -
Sebi120g00007 810 MobiDBLite consensus disorder prediction 324 339 - -
Sebi120g00007 810 MobiDBLite consensus disorder prediction 379 427 - -
Sebi120g00007 810 SMART serkin_6 432 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi120g00007 810 Gene3D Transferase(Phosphotransferase) domain 1 653 777 - -
Sebi120g00007 810 MobiDBLite consensus disorder prediction 310 364 - -
Sebi120g00007 810 ProSiteProfiles Protein kinase domain profile. 391 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi120g00007 810 MobiDBLite consensus disorder prediction 233 273 - -
Sebi120g00007 810 MobiDBLite consensus disorder prediction 222 273 - -
Sebi120g00007 810 MobiDBLite consensus disorder prediction 340 364 - -
Sebi120g00007 810 Gene3D Transferase(Phosphotransferase) domain 1 505 574 - -
Sebi120g00007 810 FunFam serine/threonine-protein kinase D6PK-like 509 576 - -
Sebi120g00007 810 FunFam serine/threonine-protein kinase D6PK-like 654 777 - -
Sebi120g00007 810 CDD STKc_phototropin_like 443 783 - -
Sebi120g00007 810 SUPERFAMILY Protein kinase-like (PK-like) 445 780 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi120g00007 Sebi-Chr120 106644 109800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi120g00007 380 810 AGC Kinase Gene Family AT2G36350 62.796 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi120g00007 Pkinase 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi120g00007 - - gmx:100789339 1321.99