Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00142 ATGGCGACGTACTTTCATGGCAGCACTTCAGAAATCCAATCCTCTGCAGAAGGGTTACAGACACTTTACCTTATGAATCCAAACTACGTACCTTACTCTGATGCAGCGCAACACCCAACGCCCAACATGCTTCTCGTCAATCCCAATACTTCTACTACTTCATCTCCTCCCGCCAACGCGCTTAACCTCTCCAACTTCTCCCACGCGCCCCCACCTCCATCACCTAATAATAATCACCACCACCAACAACAACACTTACTTGGAGTTACCATTCCCTCATCAAACATCCTCGGATCCACCACCACCGACACTCCAAACCAACGCTCCTTCCTCGGACAACATGAAATCTCCGCCTTCCACGGCTTTCCCGCCGCTGCTACTTCAGCCGCAAATAATCCTCGTCTCCACTATAACCTATGGGGTTCGATATTTAATCAAACCCCATCATTAGTCACAGCAGCAACGATAGCCATCCCGACTTTCAGGTCTTTCTCCGGCGAGATGGATGCTTCCGGAAGCCGTGGCGGTGATGATGTGCGGGTTGTGGGGAATGGAATTTCGAGCATGCAGAGCGTTGTGTTGGGTTCCAAGTATTTGAAAGCGGCGCAGGAGGTTCTGGATGAAGTTGTGAATGTGGAGAAGATGAAGGCGAATATTGAATCCACGTCTGGAGGAGAAAATAGTGGTGGAGGAAAGCAACAAGCTGGAGGAGTAGAATTAAGCACTGCACAGAGACAAGAGCTTCAGATGAAGAAGACCAAGCTTGTCACCATGCTCGATGAGGTAGAGCTAAGGTACCGACAGTATCACCAACAAATGCAAATGGTGATATCATCATTTGAGCAAGCAGCGGGATATGGGGCAGCAAAATCTTACACAGCTCTTGCCTTGAAGACAATCTCAAAGCAATTTCGATGTCTTAAAGATGCAATTGCTTCACAAATTAAGACAACTTGCAAGAGCTTGGGTGAAGATGATTGCTTAGGTGCTAAGGTAGAAGGTTCTAGGCTGAGGTATGTTGATCACCATCTCCGACAACAGCGGGCATTACAGCAACTTGGAATGATCCAACACAATGCTTGGAGGCCCCAAAGAGGCTTACCTGAAAGAGCTGTTTCCGTTCTTCGTGCTTGGCTTTTTGAGCATTTCTTGCACCCCTATCCTAAGGACTCCGACAAGGTTATGCTTGCAAAACAAACTGGACTAACTCGGAGTCAGGTTTCTAACTGGTTTATAAATGCCCGAGTTCGGCTATGGAAACCAATGGTTGAAGAAATGTACATGGAGGAAATCAAGGATCAAGAGCAGAACAGTGGCTCACAGGATAACACAAACAAATCAAAAGATCAATCAAGCAAGGAGTTATGGTCAGGTAGTGCTAATGCTACACATGAATCATCAGGTGCAATAAAACTTCATTCAAAAGCAGAAAGCTTCAACAACCAAAACACTTCTCCAACTGAGATCTCCAATTCCAATTCATTGTCAACATCTCCCATTGGAGGAGGAGGAGGATCCTTCCAATCCTTCCATCTTACAGGGTCATCTCCAAACAAGCCAAGAAGTAACTCTGAAATGCAAAACTCCCAAGGCAGCACCCTTTCAGGAGAGACACCAAATAGAGATGCAGTACTCAACACAAAGTTTGACATTGAAAGACACCGCAAAGATGGATACTCTTTAATGACATCTGGCAATGAGAGTTATGGAGCATTCTCAATGGAAGATATTGGAAGGTTTAATGTCACTGATCAGCAGCAGCAATTGGCTCCAAGGTTTCATGGAAATGGTGTTTCTCTAACACTTGGACTTCCCCACAATGAGAATCTTTCTCTCTCAGCTGCAACACAGCATGGGTTTCTCTCACAGAACATGCATTTGGGAATGGGAAGCAATGAGAATGAGTTTTGTGCTATCAACAGTAATCAACCATCTTCTCATTCTGCCACCAGTTATGAAAGTATTGACATTCAAAACAGAAAAAGGTTTGCTGCTGCCCAGTTATTGCGGGATTTTGTGGCCTAA 2025 0.4538 MATYFHGSTSEIQSSAEGLQTLYLMNPNYVPYSDAAQHPTPNMLLVNPNTSTTSSPPANALNLSNFSHAPPPPSPNNNHHHQQQHLLGVTIPSSNILGSTTTDTPNQRSFLGQHEISAFHGFPAAATSAANNPRLHYNLWGSIFNQTPSLVTAATIAIPTFRSFSGEMDASGSRGGDDVRVVGNGISSMQSVVLGSKYLKAAQEVLDEVVNVEKMKANIESTSGGENSGGGKQQAGGVELSTAQRQELQMKKTKLVTMLDEVELRYRQYHQQMQMVISSFEQAAGYGAAKSYTALALKTISKQFRCLKDAIASQIKTTCKSLGEDDCLGAKVEGSRLRYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKDQEQNSGSQDNTNKSKDQSSKELWSGSANATHESSGAIKLHSKAESFNNQNTSPTEISNSNSLSTSPIGGGGGSFQSFHLTGSSPNKPRSNSEMQNSQGSTLSGETPNRDAVLNTKFDIERHRKDGYSLMTSGNESYGAFSMEDIGRFNVTDQQQQLAPRFHGNGVSLTLGLPHNENLSLSAATQHGFLSQNMHLGMGSNENEFCAINSNQPSSHSATSYESIDIQNRKRFAAAQLLRDFVA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00142 674 SMART prehox3 187 313 IPR006563 -
Sebi11g00142 674 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 78 444 - -
Sebi11g00142 674 Pfam Homeobox KN domain 378 417 IPR008422 GO:0003677|GO:0006355
Sebi11g00142 674 Pfam Associated with HOX 192 312 IPR006563 -
Sebi11g00142 674 FunFam BEL1-like homeodomain protein 9 364 426 - -
Sebi11g00142 674 SUPERFAMILY Homeodomain-like 362 428 IPR009057 -
Sebi11g00142 674 SMART HOX_1 361 425 IPR001356 GO:0003677
Sebi11g00142 674 Gene3D - 364 443 - -
Sebi11g00142 674 ProSiteProfiles 'Homeobox' domain profile. 358 421 IPR001356 GO:0003677
Sebi11g00142 674 MobiDBLite consensus disorder prediction 45 82 - -
Sebi11g00142 674 MobiDBLite consensus disorder prediction 437 542 - -
Sebi11g00142 674 CDD homeodomain 361 422 IPR001356 GO:0003677
Sebi11g00142 674 MobiDBLite consensus disorder prediction 432 543 - -
Sebi11g00142 674 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00142 Sebi-Chr11 3448872 3452538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00142 1 674 Homeobox Transcription Factor Family AT2G35940 43.507 4.57e-142 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Sebi11g00142 POX 9.1e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00142 - - gmx:100786883 796.578