Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00112 ATGGGTATGCTATTATTGCCCGCTGTTGTTATCATGGCACTGGTGCAATGTAGAACAAGCTTATTGCAACACTGGGTGGAAAAGAACTATGGTCAGGACTTTGAGTTCTTAAGACTGGACCATTTTGATTGGGAGATGGAATTGGGGGTTAGTGGATTGAGAACAATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGCGGAGCTTTTGGAGCTGCTATTCTTGTTAATCACAAGGCCGAGAAAAAGAAATATGTGTTGAAAAAAATCAGGCTTGCGAGGCAGACTGAACGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCTCGAATCCAGCACCCTTATATTGTGGAATTCAAGGAGGCGTGGGTTGAGAAGGTGATAGACCCTTTAAGTTTTAGTATGAAGGTTGCTATGTCTGCATTGTCACCGGATACTGTGAAGGTGGAGACATGTGATTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCATATGGATTCAAATCTGATATTTGGTCACTAGGATGCTGTGTATACGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAATCGTTCCTCTATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGAGCATGCTGAGAAAAAATCCTGAACATCGGCCTACAGCATCTGAGGTGTTAAAGCACCCTTATTTGCAACCTTATGTTGATCAATATCGTCCATCTTTCAGTCCTCCAACAGCGTGTTCTCCTCAAAAACCAATTTCTGCTGTCAACGATCCTCGAAAAAATATGGCTGAAAGTCAAAACAGTAACAGTTCAAGTAGTGACAAAGATAGTTTGATGCCCAGTGAGAGAAACATTGCAACATCAGTACCAAGGTGTGATAACAAAGCCACTGAGACGGATCTTGCATCATTTGATGATGATGGCTCGGAGCATCCCCTGCCTAGTGAGGAAGAAAATGGCTCTAGTAATGCCCATGCCAAAACAGCTGAGCATGAGGTGATGAAACCATTTCATAATGAACAGTGTTCTAATATTGAATCTAAGCAGCCAAAAACAATCAGAAATATAATGATGGCATTGAAAGAGGGAAAAGTTAGAGAAGCAACTTCTCCGATGAGGGGAAATCGGATAAAGGCCGGTGGTGTATCAACACAGAAAATAAATACAGAGACATTGTCTAAATTGCCTAAACCCACTATTATTGCTCCTGGTTTGAAGCCTAATTTAGAGTCACCAACTGTTTCACATGCAAAGGCAACCCCTGATTCTGGCAAACGAATACAGGGATCGCATCATTCAAAGCATCAGTTACTTATGACAGAGCCCTCACCAAAAGTTAAACCCAGACATGATTTGACTCCACCATCTGGCTTTATCAAACAAGTAGAAGGAGATGGAGTTCCTCCCAAGCCAAGGCAAAGGACTCCCCCAAGCTTACTTAGACGGCCTTCATTTTCAGGACGAATGAGGCTGGCTGGATTTGATGTCCCAAATGCAGCAAATGATACCGGGAAGCTAGGTCCATCTAAAATAGTCCAGGAGCCTGAGATGAGCCATTATCAATTGACAAATGGCAATGCACCACATATTTCTAGACAGATTACTAGAGAACCTCAGAAGGCTTTTGAAAGAAGTTCCAAAGGAATGCAAACAGACAGCAGTAATTCTGCTTCATCTTCAGTTTCTATTCAAGGATGTGAACTTGCTGATGATGCAACAACTTTTATTGACATGAGAGAGCATATGCTTCCTGATCATGAGAGTGTGACCCACATTGTCGGTGTGGAATCATGTCCAGAAAGCAGCCCATCTACAACCTGTTCACGGTGTAATATGGTTGAAGAAGTGTCTGAGGAAACCTGTGAAGTCAACCTGAATTTTCAGGATACTATTAGTAGTAATGAAAAAGCGAGTTCCAGTTTAACTTTGGATCACCTTGTTGAAGATTCTAAGGTAATGTTTGCTTCGGAAGATAGTCTTCCCATAAATCAGACAACAGTATCTACTGTCTCCAGGTGTGATAATAGACCTGTAGACCCCCCTGCTGAAGCCACCAAAGAAATCAAAGATCTTCAAGATATTTCTAAGGAAATGGCTTTAACCAAGTCTCTCAAACATCAATCCCCAATTTCTGGAGAAAAGTCTGTTTGTGAAGAGGTTAGTCCAGTAAGCAAACTCAATAATAGCCCTGATATAGTTAGCCAGCCAAAACATGCGTGTAAGTCCACTGGTGATGACAAGTTTACAGTGAGGGAGCGACTCTCATCTGTCGCTGAAACTGCTCCTCTGATTACCACTACTAAAATAACAAGCCAGAAAGTTTTGCAAGAGAAAGGAACTGTCTTGCAGAATCCAGCACCAGAAAGGCCGGATACTGGCCATCTTCCTCCAGCCTTTGATGATGTCATCCATGTTATACGCCATAGTAGTTATCGTGTTGGAAGTGAGCAGCCAGTAAAGGAATCTGTGGAGATGGGAGTTCAAAATGTAGATGTTGGTAAATTTATCAATGTTGTGAGGGATGATTTAGAAATGAGAAACATAAGCTCTCCTTTGGCGCATAAATCTTCAAGTTGCTCCGAAGCTGCAAGCTTAAAATCAAATGTTTCTGATCAGTTGGAAATGAGAAACAGTAGCACCCCTCCTACCCTTAAATCTTCAAGCTTCTCTGATGCTTTGAGCTCAAAATCAAGCATTTCTGATCACCCTGGTATTAAGGAACAAGATGTAAGTAACCCTGTTTCTTTAGTTTCAGAATCTGATTCCACCGAGCTCAGTAAATGTAACACTCGAACAACTGAAGACAAACCACCAGCAAAGGAAGCACTGGATGTGAAATCTTTCAGGCAGAGAGCAGAAGCACTTGAAGAGCTCTTGGAATTGTCAGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCTTTTGGGAAAGATAAGGTCTCCCCAAGGGAGACAGCAATTTGGCTAGCCAAGAGTCTTAAAGGAATGATGTCTGAGGAAAGTGGGGGACGCAGTTCATGA 3162 0.4241 MGMLLLPAVVIMALVQCRTSLLQHWVEKNYGQDFEFLRLDHFDWEMELGVSGLRTMESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKVIDPLSFSMKVAMSALSPDTVKVETCDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKSMLRKNPEHRPTASEVLKHPYLQPYVDQYRPSFSPPTACSPQKPISAVNDPRKNMAESQNSNSSSSDKDSLMPSERNIATSVPRCDNKATETDLASFDDDGSEHPLPSEEENGSSNAHAKTAEHEVMKPFHNEQCSNIESKQPKTIRNIMMALKEGKVREATSPMRGNRIKAGGVSTQKINTETLSKLPKPTIIAPGLKPNLESPTVSHAKATPDSGKRIQGSHHSKHQLLMTEPSPKVKPRHDLTPPSGFIKQVEGDGVPPKPRQRTPPSLLRRPSFSGRMRLAGFDVPNAANDTGKLGPSKIVQEPEMSHYQLTNGNAPHISRQITREPQKAFERSSKGMQTDSSNSASSSVSIQGCELADDATTFIDMREHMLPDHESVTHIVGVESCPESSPSTTCSRCNMVEEVSEETCEVNLNFQDTISSNEKASSSLTLDHLVEDSKVMFASEDSLPINQTTVSTVSRCDNRPVDPPAEATKEIKDLQDISKEMALTKSLKHQSPISGEKSVCEEVSPVSKLNNSPDIVSQPKHACKSTGDDKFTVRERLSSVAETAPLITTTKITSQKVLQEKGTVLQNPAPERPDTGHLPPAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKFINVVRDDLEMRNISSPLAHKSSSCSEAASLKSNVSDQLEMRNSSTPPTLKSSSFSDALSSKSSISDHPGIKEQDVSNPVSLVSESDSTELSKCNTRTTEDKPPAKEALDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00112 1053 ProSiteProfiles Protein kinase domain profile. 1 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 893 980 - -
Sebi11g00112 1053 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 578 604 - -
Sebi11g00112 1053 Coils Coil 990 1016 - -
Sebi11g00112 1053 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 153 600 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 280 368 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 585 604 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 439 525 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 893 968 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 339 355 - -
Sebi11g00112 1053 Pfam Protein kinase domain 154 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi11g00112 1053 Pfam Protein kinase domain 63 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi11g00112 1053 Gene3D Phosphorylase Kinase; domain 1 41 136 - -
Sebi11g00112 1053 SUPERFAMILY Protein kinase-like (PK-like) 50 325 IPR011009 -
Sebi11g00112 1053 Gene3D Transferase(Phosphotransferase) domain 1 142 341 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 765 785 - -
Sebi11g00112 1053 MobiDBLite consensus disorder prediction 300 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00112 Sebi-Chr11 2713427 2719925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00112 51 271 MAP Kinase Kinase Kinase AT1G53570 25.926 3.89e-21 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Sebi11g00112 Pkinase 7.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00112 K08857 - gmx:100784761 1439.09