Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00080 ATGGAAGATCTACCACCTGGTTTTCGCTTCTTCCCAACTGAAGAAGAGTTAGTTGGCTTCTACCTACACAACAAGCTAGAAGGGCAAAGCAACTCCATAGAAAGAGTTATCCCAGTCATTGATATCAATGGGGTAGAGCCGTGGAACCTTCCAAGTCAAGAGAGGGAAGCTAGGGGAGGCAGACCCAACAGAACCACAGCTTGTGGGTATTGGAAAGCAACAGGTTCTCCTGGATACGTTTACTCTTCTGACAACAAAGCCATTGGGGTGAAGAAAACCATGGTCTTCTACAAAGGGAAAGCACCTACTGGAAGGAAAACTAAATGGAAGATGAATGAGTACAAAGCCATCCAAGTCTCTAATCCTCAATCAAACACAGCAACCCCTCAGGCTGCTAGCAGATTGGATGGATCAAGTTCATCTCAAACTTCCCACTTAAGGGGACTCCATAGTGTTCATCTGCCAGAGGCTGGAGGCTCAAGTAGCACTAATTGGAATGTAAATAATAATGATAATGAGGTCCAACTCCAGGACCCGCTATGGGGAGGATGGGAATGGGAACAACTTAATTGGCTCTAA 579 0.456 MEDLPPGFRFFPTEEELVGFYLHNKLEGQSNSIERVIPVIDINGVEPWNLPSQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKAIGVKKTMVFYKGKAPTGRKTKWKMNEYKAIQVSNPQSNTATPQAASRLDGSSSSQTSHLRGLHSVHLPEAGGSSSTNWNVNNNDNEVQLQDPLWGGWEWEQLNWL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00080 192 Gene3D NAC domain 13 143 IPR036093 GO:0003677|GO:0006355
Sebi11g00080 192 MobiDBLite consensus disorder prediction 152 171 - -
Sebi11g00080 192 Pfam No apical meristem (NAM) protein 5 115 IPR003441 GO:0003677|GO:0006355
Sebi11g00080 192 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 118 - -
Sebi11g00080 192 MobiDBLite consensus disorder prediction 156 171 - -
Sebi11g00080 192 SUPERFAMILY NAC domain 3 118 IPR036093 GO:0003677|GO:0006355
Sebi11g00080 192 ProSiteProfiles NAC domain profile. 4 138 IPR003441 GO:0003677|GO:0006355
Sebi11g00080 192 MobiDBLite consensus disorder prediction 118 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00080 Sebi-Chr11 2049773 2050834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00080 2 191 NAC Transcription Factor Family AT5G22380 43.697 1.54e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi11g00080 NAM 7.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00080 - - gmx:100781321 256.529