Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00078 ATGGTTCCACTAATAGGAAGCCAGCCTAGAGGAAATAGAAGCGTACATAATAGAGATAAAGGAACCAACTTGCTAGTTGAGATTTGCATCTCTGGTGAACACGTAAGGCAGAAGATGAAGTACATGAGGTTCCTTCGCAAGCACATGATCCCATCCACTTCCATGCTCCTGCAAAAGACCTTGTGGGGCTCCGTTCGTGGAATTATACCACATAGGACAAAGCATGGATCAATCATGGAAGTGCATTGA 249 0.4458 MVPLIGSQPRGNRSVHNRDKGTNLLVEICISGEHVRQKMKYMRFLRKHMIPSTSMLLQKTLWGSVRGIIPHRTKHGSIMEVH 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00078 82 SUPERFAMILY Ribosomal protein L13 27 78 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00078 Sebi-Chr11 1958170 1958418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00078 21 77 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 50.746 3.28e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00078 K02872 - csv:101213484 60.4622