Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00070 ATGATATTCAATTCAATGACAGGAATCAACAGTAACGTGGAAGAGTCACAACAGATGGATGCAGAGAATGATTTGTTGCAAGGTTTGGATGATATGACCATTACTGATGAAGAAGTTGAAGAAAGTAGTGATGAGGAGGACAATGATCCTTGTGGTGAAACAGATGGTGAAGATAGTGGTGATGGAACGGAACATGCTAATATGGAAGAAGCTATCAATATAGATAGTTTGCAGGACATTCAAAATTTGGATATGAAGAATATTAGCCCCGAAGATGTCAAGCGGGAGGGGGAAAGGGATAAAAAGAGGCAAAACAATAAACCTAAGCGTGAAGCAAAACGTAAAATAATGTGTGGTTGTAAGGCAAGACTTCGAGTCCATGTTGACATCAATTCTGGTCGTTGGTATGTGACAATTTTTGATCATTTACACAACCATGAGATGCTAGGTGAAAGGCTTTGTGCCATGTTGCCAGCCCATAGGAAAATGAGTCCAGCAGATATAATGGAAATGAACAGCTTGAGAAATGTTGGGATAAGCACACCTGATATCTATGCTGCATTTGCAAGTCAATCAGGGGGATACCATAAGATTGGATTTCGAAAAAAAGACTTGTATAATCAGATTGGTAGACAGAGGCGTCTTCGAGCATCTGATGCTATAACAGCTATAGAGTACCTTGAAGGCCTTCGTGCACATGATCCATACTTGTACTTGTCATGTAATATTGATGTGGCGAAATTTCAAATCCGATGGGACCAAATGGTGTCTAAATTTGGCTTGGAAGATCATTGTTGGGTGAAAGAGTTGTATGAGAAGCGAAAGATGTGGGCCTCAGCACATATCAGAGATGCTACCGAAATCCCAAAGTCTTTAATTCTGGATAGGTGGACCAAGATTGCTAAGGAGTCAATTCGTGGATCTTTTAGTGATGCTTCTTATTTTTGGGACTCTCAATTGATGGCTCGATATGTGTCACTACTTGAGCTATGTAGACAATTGTGCAACCTAGCACATCATGACGATGAAGATTTTAATCATATTAGAGAGATCATAACTTCTGAAATACAAATTCTGAAAGATAAGCATGGTGCACAATTCGCCCAAGAAAATACCGAGTCTCAAATCTTGGATGGTAATTTGCGGAATCCAGCCAATGTAAGGTCGAAAGGGTGTGGAACCAGATCTGGTTCTGGAACTACAAGAGGCAAACGCTTGAACAAGTGTAGTGTTTGTGGGGTTGCTTGCCATAACAAGAAATCTTGCCCACAACAAAGGCCCGTTAATGATGTTGACCCATCTATGTGTGGCAACTCAATGCGAGAGGTTGGTGAAGGTAGCGGTCTCAACAACATCAACCTTTCCGTAGACCCATGTTGTTCTCGGTTGAATGATAACCCACCACTACAATAA 1413 0.4091 MIFNSMTGINSNVEESQQMDAENDLLQGLDDMTITDEEVEESSDEEDNDPCGETDGEDSGDGTEHANMEEAINIDSLQDIQNLDMKNISPEDVKREGERDKKRQNNKPKREAKRKIMCGCKARLRVHVDINSGRWYVTIFDHLHNHEMLGERLCAMLPAHRKMSPADIMEMNSLRNVGISTPDIYAAFASQSGGYHKIGFRKKDLYNQIGRQRRLRASDAITAIEYLEGLRAHDPYLYLSCNIDVAKFQIRWDQMVSKFGLEDHCWVKELYEKRKMWASAHIRDATEIPKSLILDRWTKIAKESIRGSFSDASYFWDSQLMARYVSLLELCRQLCNLAHHDDEDFNHIREIITSEIQILKDKHGAQFAQENTESQILDGNLRNPANVRSKGCGTRSGSGTTRGKRLNKCSVCGVACHNKKSCPQQRPVNDVDPSMCGNSMREVGEGSGLNNINLSVDPCCSRLNDNPPLQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00070 470 MobiDBLite consensus disorder prediction 36 113 - -
Sebi11g00070 470 MobiDBLite consensus disorder prediction 36 57 - -
Sebi11g00070 470 MobiDBLite consensus disorder prediction 88 113 - -
Sebi11g00070 470 PANTHER OS01G0519700 PROTEIN 95 227 - -
Sebi11g00070 470 Pfam FAR1 DNA-binding domain 94 148 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00070 Sebi-Chr11 1837375 1840176 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi11g00070 FAR1 2.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00070 - - tpra:123913749 169.088