Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00060 ATGGCAGAAGCGGAGGAACTGCCAAGGACTATCGTGCGCCGCGTGGTGAAGGATAAGCTCTCCCGTTGCTCCGAAGAGGGTGACATTTCCGTCCACAAAGACGCTCTTCTCGCATTCTCAGAAAGCGCTAGGATCTTCATCCACTACCTTTCTGCAACGGCTAATGACATATGTAAGGAGTCAAAGAGACAGATTATCAATGCTGAGGATGTTTTCAAAGCTCTTGAAGAAACTGAGTTCACTGAGTTTGCTCGCCCTCTAAGAGCTTCTCTAGAAGAGTTTAGGAGGAAGAATGCTGGGAAGAAAGCGGCAATGTCGAAGGGAAAAGGAAATGAGACGAAAAAGAAAAGAAAGTCTGAAGGTGAGTCATCTGATAAAGGTGAGGATGATGACAGCCAAGGAGACCAAAGGGATGAGTCATGA 423 0.4681 MAEAEELPRTIVRRVVKDKLSRCSEEGDISVHKDALLAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEETEFTEFARPLRASLEEFRRKNAGKKAAMSKGKGNETKKKRKSEGESSDKGEDDDSQGDQRDES 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00060 140 Gene3D Histone, subunit A 1 140 IPR009072 GO:0046982
Sebi11g00060 140 FunFam DNA polymerase epsilon subunit 3 1 140 - -
Sebi11g00060 140 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 138 - -
Sebi11g00060 140 MobiDBLite consensus disorder prediction 107 140 - -
Sebi11g00060 140 MobiDBLite consensus disorder prediction 94 140 - -
Sebi11g00060 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Sebi11g00060 140 SUPERFAMILY Histone-fold 7 120 IPR009072 GO:0046982
Sebi11g00060 140 Coils Coil 58 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00060 7 117 CCAAT-HAP3 Transcription Factor Family AT3G53340 28.829 9.24e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sebi11g00060 CBFD_NFYB_HMF 1.8e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00060 K02326 - gmx:100306382 180.644