Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00044 ATGGGTTACAGTAGGATTTTCAGCTGTTACAGTGGTGGGAGCAATTTCAGTAAATGTGTTACTTTGGCAGAAGAGAAAGAAGGAAAGCAAAAAAGAAGAGGCTATAATTTAGCCTCAATCAACGATGACCTCGAAAGAGGAGCAGGGCCAAGAAGGTTTTCCTACACAGAGCTTGCATTGATTACCAATAACTTCTCCCAGGACAGGAAGTTGGGTCAAGGTGGGTTTGGAGCTGTTTACAGAGGTTACTTTGCTGATTCAGATTTAACAGTTGCTGTGAAGATAATTTCAAAGGGTTCTAGACAAGGGAAGAAAGAGTATGTAACAGAGTTGCTGCATTAG 342 0.4152 MGYSRIFSCYSGGSNFSKCVTLAEEKEGKQKRRGYNLASINDDLERGAGPRRFSYTELALITNNFSQDRKLGQGGFGAVYRGYFADSDLTVAVKIISKGSRQGKKEYVTELLH 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00044 113 Gene3D Phosphorylase Kinase; domain 1 50 112 - -
Sebi11g00044 113 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Sebi11g00044 113 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 111 - -
Sebi11g00044 113 SUPERFAMILY Protein kinase-like (PK-like) 49 107 IPR011009 -
Sebi11g00044 113 ProSiteProfiles Protein kinase domain profile. 65 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00044 Sebi-Chr11 1230155 1230631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00044 17 111 Receptor kinase-like Gene Family AT5G10530 55.789 1.33e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi11g00044 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00044 - - gra:105804125 128.257