Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00014 ATGGCCTCATCCACTGTCGCAGACACAGAGATGAAGCCATTCTCCGTGCTCTTCGTGTGCCTTGGCAACATCTGCAGGAGCCCAGCTGCTGAAGGAGTCTTCACAGACTTGGTCAAGAAAAAGGGTTTTGATTCCAAGTTCAAAATCGATTCTGCTGGAACAATCAATTACCACGAGGGCAATGAAGCTGACCCGAGAATGAGGGCAGCCTCCAAAAGGCGTGGGATTCAGATAACTTCTATTTCGAGGCCAATCAAGCCCTCTGATTTCATTGACTTTGATCTCATTCTTGCTATGGACAAGCAAAATAGAGAGGACATTTTGGAGGCCTTCAATAGATGGAAATTTAGACATACTATACCTGATGATGCACATAAAAAGGTTAATTTGATGTGCTCATATTGCAAGAAGCATGATGAAACTGAAGTCCCAGATCCTTACTATGGTGGACCGCAAGGGTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCCTGTGAATCATTGCTGGAAAACATTTTGGCAGAAAATAAGGATATGCAAGAATCCTAA 549 0.4335 MASSTVADTEMKPFSVLFVCLGNICRSPAAEGVFTDLVKKKGFDSKFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIKPSDFIDFDLILAMDKQNREDILEAFNRWKFRHTIPDDAHKKVNLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLENILAENKDMQES 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00014 182 CDD LMWPTP 15 170 - -
Sebi11g00014 182 Coils Coil 158 178 - -
Sebi11g00014 182 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 3 177 - -
Sebi11g00014 182 PRINTS LMW phosphotyrosine protein phosphatase signature 143 158 IPR017867 GO:0004725|GO:0006470
Sebi11g00014 182 PRINTS LMW phosphotyrosine protein phosphatase signature 16 33 IPR017867 GO:0004725|GO:0006470
Sebi11g00014 182 PRINTS LMW phosphotyrosine protein phosphatase signature 59 75 IPR017867 GO:0004725|GO:0006470
Sebi11g00014 182 SUPERFAMILY Phosphotyrosine protein phosphatases I 11 172 IPR036196 -
Sebi11g00014 182 Gene3D - 2 177 - -
Sebi11g00014 182 SMART LMWPc_2 14 171 IPR023485 -
Sebi11g00014 182 FunFam Low molecular weight protein-tyrosine-phosphatase 13 177 - -
Sebi11g00014 182 Pfam Low molecular weight phosphotyrosine protein phosphatase 16 169 IPR023485 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00014 9 176 Protein tyrosine phosphatase (PTP) family AT3G44620 67.539 7.71e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00014 K25307 - gmx:100527219 329.331