Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00009 ATGGACTTTATTGGGATTAATAAATCAGCTCCTTCTTCCACTAGTTCATCATCTCACAAGAGAAAAGCAGGGAGAAAAAAGTTCAGGGAAACTAGGCACCCGGTGTATAGAGGTGTACGGCAGAGAAACGGCAACAAATGGGTGTGTGAAATCAGGGAACCAAACAAGAAATCAAGGATTTGGGTTGGGACTTACACCACACCTGAAATGGCTGCTAGGGCACATGATGTGGCTGTTTTAGCACTTAGAGGCACATCAGCAGAGTTCAATTTCCCTGATTCAGCTATGCTCCTTCCAGTTGCAAAGTCATGTTCAGCCACAGATATAAGAGAAGCAGCAGCAAAAGCCACTCATGATCATGAGGGTTTCAAACCAAGCAGCAGCCCTAATGATGATGAGTCCAAAACAAGAATATTCTTGGATGAGGAGGCACTGTATAATATGCCAGGTTTGTTAGATAGTATGGCTGAGGGTTTGCTTATTACCCCGCCATCTATGAAGACAGCATTGGATTGGGACAACATTGAATGTGAAATAGACCTCACTCTATGGACAGACTAG 561 0.4385 MDFIGINKSAPSSTSSSSHKRKAGRKKFRETRHPVYRGVRQRNGNKWVCEIREPNKKSRIWVGTYTTPEMAARAHDVAVLALRGTSAEFNFPDSAMLLPVAKSCSATDIREAAAKATHDHEGFKPSSSPNDDESKTRIFLDEEALYNMPGLLDSMAEGLLITPPSMKTALDWDNIECEIDLTLWTD 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00009 186 CDD AP2 36 94 IPR001471 GO:0003700|GO:0006355
Sebi11g00009 186 MobiDBLite consensus disorder prediction 19 33 - -
Sebi11g00009 186 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Sebi11g00009 186 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Sebi11g00009 186 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Sebi11g00009 186 MobiDBLite consensus disorder prediction 115 134 - -
Sebi11g00009 186 MobiDBLite consensus disorder prediction 1 34 - -
Sebi11g00009 186 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
Sebi11g00009 186 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Sebi11g00009 186 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Sebi11g00009 186 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Sebi11g00009 186 FunFam Ethylene-responsive transcription factor 2 34 93 - -
Sebi11g00009 186 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 13 185 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00009 Sebi-Chr11 220851 221411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00009 15 185 AP2-EREBP Transcription Factor Family AT4G25470 49.198 1.25e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi11g00009 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00009 - - gmx:100793751 258.84