Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi11g00005 ATGAGATTGGAGAAGTGCTGGTTCTGTTCTTCTACTATATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCAAAGATTTTTCGGTTTTGTAGATCTAAATGCCACAAGAACTTCAAAATGAAGAGGAATCCTCGGAAGGTGAAATGGACCAAGGCATACAGGCGGGTGCATGGAAAGGATATGACACAGGATTCAACCTTCGAGTTTGAGAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTGCTGAGAATGTCCTCAAGGCCATTCCAAAGATTGATAAGATCAGAGTGAGCAGGGAGGAGAAACACCACAAGAATAGGATGAAAGGCAAGAAGCAGAAGCTGCAGATGGAGGCAGTTAAAGAGTTGGAGCAGGGCATCAGTCTGGTCAAAGCTCCTTCTGTCCTTCAAAAGGATCCGTCTCTCACTTTACCAAAGATCAAAGTCAGTGTTTCTCAACAACAAGCACAAGAGAATCATCCCATGGAAGAGTGA 507 0.4398 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREEKHHKNRMKGKKQKLQMEAVKELEQGISLVKAPSVLQKDPSLTLPKIKVSVSQQQAQENHPMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi11g00005 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 166 IPR000988 -
Sebi11g00005 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Sebi11g00005 168 SMART 4TRASH 6 44 IPR011017 -
Sebi11g00005 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Sebi11g00005 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Sebi11g00005 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Sebi11g00005 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Sebi11g00005 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi11g00005 Sebi-Chr11 148982 150184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi11g00005 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.048 1.62e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi11g00005 K02896 - gmx:100793564 338.576