Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi119g00060 ATGGAGATAGAAGCAGCCAGTGGAAGCAACAAAGGCGGTAGCTGGGGTGCTACTGAAAGTGAGGCACCATATGGTGGCTTTGATAGGGGAAGCTTCTTGGCTTGGGAAGATCTAAGAGTGGTGATACCAAACTTTGGGAAAGGACCAACCAAAAGGTTGCTTAATGGGCTTAATGGGTATGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCAACCCTCCTTGATTCCCTTGCAGGTAGACTCTCAAAAAATGTGGTCATGACAGGAAATGTTCTTCTGAATGGGAAGAAAAAAACCCCGGGCTACGGCTTTGTTGCTTATGTGACTCAAGAGGATGTGTTGATGGGAACTCTTACTGTGAAGGAAACCATAACATATTCAGCATATCTACGTCTTCCAACTACAATGAGCAAAGAAGAAGTTAGTAGCATTGTGGATGGAACAATAATAGAAATGGGTCTCCAAGATTGTGCTGATAGGTTGATTGGTAACTGGCACTTGAGAGGTATAAGTGGAGGAGAGAAGAAAAGACTCAGCATTGCACTTGAGATCCTTACAAGGCCTCGCTTACTTTTCCTTGATGAACCAACCAGTGGCCTAGATAGTGCCTCAGCATTTTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGAAGGACAGTTATCTCTTCCATTCACCAGCCAAGCAGTGAAGTTTTTGCACTCTTTGATGACCTTTTCTTGCTATCTGGTGGTGAAACAGTTTATTTTGGAGAAGCAAAAATGGCTGTAGAGTTTTTTGCTGAAGCTGGTTTTCCTTGTCCACGGAAAAGAAATCCTTCTGATCACTTCCTGCGATGCATCAATTCTGACTTTGACATTGTAACAGCTACACTTAAAGGATCTCAAAGAATTCCTGATGTTCCAAATTCATCAGATCCTTTCATAAATTTGGCTACAGCAGAGATCAAGGCAAGGCTGGTTGAGAAATATAGGCGCTCAACATATGCCAGAAGGGCCAAAAACAGGATTCAAGAACTATCTGCCCATGAAGGGCTTGAAACAGAGGCAAAGAATGGAAGTCAAGCTAGTTGGTGGAAGCAACTCTCTACACTGACAAGGAGATCATTTGTCAACATGTGTAGGGATGTGGGTTACTACTGGTTGAGGATTATAATTTACATCATTGTATCTGTATGTGTTGGAACTATTTACTTTGACATTGGCTATAGCTATACTTCTATCCTGGCTCGTGGTGCTTGTGGTGCATTTATCTCAGGATTCATGACATTCATGTCAATTGGAGGCTTTCCATCATTTATTGAAGAAATGAAGGTATTTTATAGAGAAAGGCTTAATGGATATTATGGAGTAGCAGCATATATTATATCAAACTTCCTTTCATCTTTCCCATTCTTGGTTGCTGTTGCTCTTACAACTAGCACCATCACTTATAACATGGTGAAATTCCGGCCAGGATTCATTCATTATGTGTTTTTCACTCTCAACATCTATGGCTGCATCTCAGTGATTGAGAGCCTCATGATGGTTGTAGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGAGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTATCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTGCTTGGGCAATACAGGGTGCCTACAAGAATGATTTGCTGGGGCTTGAGTTTGATCCTCTGATACCTGGTGACCCAAAATTGACTGGAGAATATGTGATCACACACATGTTGGGCATTGAATTAGACCATTCCATGTGGTGGGACGTATCAGCTCTGTTTATCATTCTCATATGTTACAGAATTCTCTTCTTTGTTATTCTCAAGTTCAAGGAGAGAGCATCCCCATTATTTCAGACACTTTATGCTAAGAGAACCATACAACAGCTTGAAAAAAGACCTTCTTTCAGGAAGATCCCTTCTTTCCCTTCCCAGAGGCACCAACCCCTTCATTCTCTGTCTTCTCAAGAGGGTCTTGATTCTCCACTCCACTAA 2076 0.4171 MEIEAASGSNKGGSWGATESEAPYGGFDRGSFLAWEDLRVVIPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLLNGKKKTPGYGFVAYVTQEDVLMGTLTVKETITYSAYLRLPTTMSKEEVSSIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIPDVPNSSDPFINLATAEIKARLVEKYRRSTYARRAKNRIQELSAHEGLETEAKNGSQASWWKQLSTLTRRSFVNMCRDVGYYWLRIIIYIIVSVCVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYIISNFLSSFPFLVAVALTTSTITYNMVKFRPGFIHYVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGAYKNDLLGLEFDPLIPGDPKLTGEYVITHMLGIELDHSMWWDVSALFIILICYRILFFVILKFKERASPLFQTLYAKRTIQQLEKRPSFRKIPSFPSQRHQPLHSLSSQEGLDSPLH 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi119g00060 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 277 IPR003439 GO:0005524
Sebi119g00060 691 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Sebi119g00060 691 MobiDBLite consensus disorder prediction 668 691 - -
Sebi119g00060 691 SMART AAA_5 63 234 IPR003593 GO:0016887
Sebi119g00060 691 Pfam ABC-2 type transporter 234 290 IPR043926 GO:0140359
Sebi119g00060 691 MobiDBLite consensus disorder prediction 667 691 - -
Sebi119g00060 691 Pfam ABC-2 type transporter 369 578 IPR013525 GO:0016020|GO:0140359
Sebi119g00060 691 FunFam ABC transporter G family member 11 27 271 - -
Sebi119g00060 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 266 IPR027417 -
Sebi119g00060 691 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Sebi119g00060 691 CDD ABCG_EPDR 30 259 - -
Sebi119g00060 691 Gene3D - 34 271 IPR027417 -
Sebi119g00060 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 28 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi119g00060 Sebi-Chr119 1855842 1862969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi119g00060 49 246 Calmodulin-binding Proteins AT2G36910 30.476 5.31e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi119g00060 K05681 - gmx:100807692 1247.65