Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi119g00016 ATGATGTCACTTTCACCTAGCTTAGGATCTCCCCACCCTTGGCTTAGAGAACTGAAATCTGAGGAAAGGGGTTTGTACTTGATCCAGTTGTTGCTCACTTGTGCAAATCATGTTGCTGCTGGTAGTCTTGAAAATGCAAATACCATACTTGAGCAAATTTCCCTGCTTGCTTCCCCTGAAGGGGATACCATGCAAAGAATTGCAGCATATTTTACTGAAGCACTTGCTGATAGGATCCTTAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCAACTAGAATGGTTATGGTTTCAGATGAAATTCTTGTTCAGAGGCTCTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCATTGCTTCTGACAAACCAGGCTATCATTGAAGCAATGGAAGGGGAGAAAATGATTCATATAATTGATCTCAATGCTGCTGAACCTGCTCAGTGGATTGCTCTCCTCCAAGTTTTGAGTTCACGTCCTGAAGGCCCTCCTCATTTGAGAATCACTGGGGTTCATCAGAAGAAAGAGATTCTAGACCAGATAGCTCATAGATTGACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAGTTCAATCCTGTAGTCAGCAAATTAGAAAATCTTGATTTTGACAAACTTCGTGTAAAAACGGGGGAGGCTCTTGCAATAAGTTCTATTCTCCAATTACATTCCCTTCTGGCATGGGATGATGACTCCATACAGAGAAAATCCCCTCTTCTGTCAAAAAGCTCAAATGGAGTTCACATGCAAAGAGTCCTGCCAATGAGCCAAAGCACATTAGGTGATTTGCTTGAGAAAGACATGGCTAATGGATATACCCCAAGTCCTGACTCAACCTCATCCTCACCAGCATCTTTAACTACTTCAAATTCAATGAATATGGAGAGATTTCTTAATGCCTTGTGGGGATTATCACCAAAGGTCATGGTTGTAACAGAACAAGACTCTCATCATAATGGTTCAACTCTGATGGAAAGGCTACTAGAAGCTCTATATTCTTATGCAGCATTATTTGATTGTTTGGAATCCACTGTCTCAAGAACCTCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGAGAGCAAATCAAGAACATTATTGCATGCGAGGGATCTGAAAGAAAGGAAAGACATGAGAAGCTGGATAAGTGGCTCCAGAGATTTGATTTAGCTGGGTTTGGTAACGTGCCTTTAAGCTATTTAAATATGTTACAAGCAACAAGATTCTTGCAGAGCTTTGGTTGTGAGGGATATAAAATGAGGGAGGAAAATGGTTGTGTAGTAATTTGCTGGCAAGATCGGTCCTTGTTTTCAATATCAGCTTGGAGATCCAGGAAGTGA 1365 0.4132 MMSLSPSLGSPHPWLRELKSEERGLYLIQLLLTCANHVAAGSLENANTILEQISLLASPEGDTMQRIAAYFTEALADRILKTWPGIHRALNSTRMVMVSDEILVQRLFFELFPFLKVALLLTNQAIIEAMEGEKMIHIIDLNAAEPAQWIALLQVLSSRPEGPPHLRITGVHQKKEILDQIAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLAWDDDSIQRKSPLLSKSSNGVHMQRVLPMSQSTLGDLLEKDMANGYTPSPDSTSSSPASLTTSNSMNMERFLNALWGLSPKVMVVTEQDSHHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERLRVEKMLFGEQIKNIIACEGSERKERHEKLDKWLQRFDLAGFGNVPLSYLNMLQATRFLQSFGCEGYKMREENGCVVICWQDRSLFSISAWRSRK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi119g00016 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 446 IPR005202 -
Sebi119g00016 454 Coils Coil 451 454 - -
Sebi119g00016 454 MobiDBLite consensus disorder prediction 279 296 - -
Sebi119g00016 454 Pfam GRAS domain family 27 451 IPR005202 -
Sebi119g00016 454 ProSiteProfiles GRAS family profile. 18 451 IPR005202 -
Sebi119g00016 454 MobiDBLite consensus disorder prediction 274 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi119g00016 Sebi-Chr119 588261 589625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi119g00016 2 454 GRAS Transcription Factor Family AT1G50420 67.965 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi119g00016 GRAS 2.9e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi119g00016 - - gmx:100814131 788.104