Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1197g00001 ATGGCCATAAACAATAATATGATTGATGTTTTGCAAGATCAAGAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTCGGGGACATTGTCAAGGTTAATCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACAAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGCAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCACTGTATACCTTCACTGGAAATCTTATAATTGAAAACCAAACACTTCCTGTCAGTCCAAATCAACTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGCATATATTGTTGGGGTTGTTATTTTTACAGGACATGAGACAAAG 441 0.3946 MAINNNMIDVLQDQEWVSIPWKKLQVGDIVKVNQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEQASEFKGEIQCEQPNNSLYTFTGNLIIENQTLPVSPNQLLLRGCSLRNTAYIVGVVIFTGHETK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1197g00001 147 Gene3D - 1 147 - -
Sebi1197g00001 147 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 147 - -
Sebi1197g00001 147 FunFam Phospholipid-transporting ATPase 1 147 - -
Sebi1197g00001 147 SUPERFAMILY Calcium ATPase, transduction domain A 5 146 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1197g00001 Sebi-Chr1197 1497 4034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1197g00001 1 147 Primary Pumps ATPases AT1G59820 79.592 8.37e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1197g00001 K14802 - lja:Lj0g3v0164329.4 278.87