Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1192g00002 ATGAGTTGCAACGGGTGCCGCGTTCTTCGAAAGGGTTGCAGCGAGTCATGTGTTTTGCGCCCTTGTTTGCAATGGATCGATAGCCCTGAAGCCCAAGGACATGCCACTGTCTTCGTAGCCAAATTCTTTGGCCGCGCAGGCCTCATGTCCTTCATTTCCAACGTCCCTGAAACCCAAAGACCTGCTCTGTTTCAGTCTCTGCTTTTCGAAGCATGTGGAAGAACGGTGAACCCTGTGAACGGCGCCGTGGGGCTTCTCTGGACCGGAAACTGGCACGTGTGCCAGGCGGCGGTGGAGACTGTGCTCCGCGGCGGCACACTCAGGCCCTTGCCGGAGCTTACCGGCCTGGACGCTCCTTCTGCGGCCACCGATGAAGCATCGGAAGTGGAAGTAGCCTGCACGGACATTTGGACGATCCGTGATCCGAATCCAAATTGCCAGCTCACAACCTCGCGATCTAATAATAACAGGATCTCTCCCGGCGGCAAACGCAAGCGGCCGGAGGCGGTGACGGCGATCAATCTCGATCTCCGTCTGACGCCGATTTTCCTGCAGAAAGTGTCGGAGAACCGCCGGCCGGGTTCGCCGTCGATGACTTCGGAGGAATCCGTCACGACGAACACGTGCCTCGGAGATCAGTGGACTCACGGCGGAGACCGGAAAGTTCTCAACCTTTTCATCTGA 684 0.5775 MSCNGCRVLRKGCSESCVLRPCLQWIDSPEAQGHATVFVAKFFGRAGLMSFISNVPETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPLPELTGLDAPSAATDEASEVEVACTDIWTIRDPNPNCQLTTSRSNNNRISPGGKRKRPEAVTAINLDLRLTPIFLQKVSENRRPGSPSMTSEESVTTNTCLGDQWTHGGDRKVLNLFI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1192g00002 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 213 - -
Sebi1192g00002 227 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Sebi1192g00002 227 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1192g00002 Sebi-Chr1192 39951 40761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1192g00002 1 227 AS2 family AT4G37540 57.937 8.10e-86 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi1192g00002 LOB 4.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1192g00002 - - adu:107481389 355.14