Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi118g00026 ATGGCTTCGTCGAAGAGCGGTAGCGGAGGAAGGATTTCTCTACACAGTATAAACGTGGAGCAATTGAAGGTTATGAAGGAACAAACAGATCTGCAAGTTAATCTTCTCCAAGATCTCTCTCTCCGCCCTCAAGACGCCAAAATCCTTGTCCCTTCTGGTTTGGACTTCTTGCAACGGTGGAGGATGCATGGGCAGGTCCAGATCGACGATTCCAGATCTCAACCCCCCCCCCAAAATGACAACGTTCACGACGACAAAGTCGGTGCGGCAAGTTCACTCGCCCCAAAGATTGGTCCAGTCGGTCTCTCTCGTAAAAGGATCGGAGAAGACATCGCGAAGGAAACCGCTAAGGACTGGAAGGGGTTGAAGGTCACTGTCAAGCTCGTGTTCCCTTTCCTCTGCAAGTATTATGCTGGGGCTTCAGCATTTAGTGAAGGCAAGAAGAAAATTCTAGATGCACAAAAGGTGCTTGATGATTTGTTGAAGAAGGATGCAACTATTGTGGAGTTGGAGAAGAGCAAAGAAAATTTTACTAAGGAGCTTGATTTTGTTTGTGATGATGCGAATAGGTGTCATATTGCATAA 585 0.4667 MASSKSGSGGRISLHSINVEQLKVMKEQTDLQVNLLQDLSLRPQDAKILVPSGLDFLQRWRMHGQVQIDDSRSQPPPQNDNVHDDKVGAASSLAPKIGPVGLSRKRIGEDIAKETAKDWKGLKVTVKLVFPFLCKYYAGASAFSEGKKKILDAQKVLDDLLKKDATIVELEKSKENFTKELDFVCDDANRCHIA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi118g00026 194 Pfam Ribosomal protein L11, N-terminal domain 82 128 IPR020784 -
Sebi118g00026 194 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 83 129 IPR036796 -
Sebi118g00026 194 Gene3D - 81 131 IPR036796 -
Sebi118g00026 194 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi118g00026 Sebi-Chr118 972935 973587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi118g00026 82 130 Cytoplasmic Ribosomal Protein Gene Family AT3G53430 75.510 2.05e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi118g00026 K02870 - zof:122001277 79.3369