Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1183g00003 ATGGATTGTGGCGGGAAACAAGTTGCAAAAACCATCACCGTTGATCAGCATGGCAAAGGAGAATTCAAGACAATTCAAGCTTCCGTTGATTCTATAAAGAGCCAAAATGATCAATGGATTAAGATTCATATAAACTCTGGCACATACAAAGAAATGGTTTCTATTCCTATAGAAAAGCCATGCATCATTTTGGAAGGAGCTGGTAGGGAGAACACAATCATTACTTATGGTGATCACCAATCAATATCAAATAGCGCTACATTCACTTCATCTCCACCTAATGTGGTTGTAAGTGGCATCACCTTTAAG 309 0.3851 MDCGGKQVAKTITVDQHGKGEFKTIQASVDSIKSQNDQWIKIHINSGTYKEMVSIPIEKPCIILEGAGRENTIITYGDHQSISNSATFTSSPPNVVVSGITFK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1183g00003 103 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 103 - -
Sebi1183g00003 103 Pfam Pectinesterase 12 95 IPR000070 GO:0030599|GO:0042545
Sebi1183g00003 103 SUPERFAMILY Pectin lyase-like 8 103 IPR011050 -
Sebi1183g00003 103 Gene3D - 5 103 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1183g00003 Sebi-Chr1183 25926 26318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1183g00003 2 103 Carbohydrate Esterase AT2G19150 50.980 1.19e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1183g00003 - - lang:109328531 152.14