Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1183g00002 AATTGCGCGATCAATGCCACACAGGGGAATTCTCTACCCTCGGGTTTTGTTACAGCCCAAGGTAGGAATTCATCAAATGACCCAAATGGTTTTGTTTTTTATGGTGGTTCCATTGATGGGAATGGTAAAGTGAATCTAGGAAGAGCATGGGGCCCTTACTCAAGAGTTATATTTCATAGAACAACTTTTTCTTCAGTGGTAACCTTAGAAGGATGGAATGCTTGGAGCTTCATAGGCCACGA 242 0.4256 NCAINATQGNSLPSGFVTAQGRNSSNDPNGFVFYGGSIDGNGKVNLGRAWGPYSRVIFHRTTFSSVVTLEGWNAWSFIGH 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1183g00002 80 Pfam Pectinesterase 1 76 IPR000070 GO:0030599|GO:0042545
Sebi1183g00002 80 MobiDBLite consensus disorder prediction 1 25 - -
Sebi1183g00002 80 SUPERFAMILY Pectin lyase-like 1 76 IPR011050 -
Sebi1183g00002 80 Gene3D - 1 79 IPR012334 -
Sebi1183g00002 80 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1183g00002 Sebi-Chr1183 24560 24801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1183g00002 15 80 Carbohydrate Esterase AT2G19150 51.515 5.44e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1183g00002 - - lang:109328531 120.168