Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1183g00001 AATTGTTTGATCAACGCCACACAATTGGAAAATAAACCTTCAGGTTTTATCACAGCCCAAAATCGAAATTCAACAAAGGATCCGGGTGGTTTTGTTTTTGCTGGAGGCTCAGTTGTTGGGATTGGTGAAGTGAATTTAGGAAGAGCATGGGGTCCTTATTCAAGAGTTATATTTCAAAATACATATCTTTCTGGAGTGGTAACCCCTGAAGGATGGAATGCTTGGAACTATGCTGGGCACGAGGAAAATTTCATGTATGTAGAATTCAATTGCACGGGAGCTGGGAGTGATACCTCAATGCGTCCCCCTTGG 312 0.4231 NCLINATQLENKPSGFITAQNRNSTKDPGGFVFAGGSVVGIGEVNLGRAWGPYSRVIFQNTYLSGVVTPEGWNAWNYAGHEENFMYVEFNCTGAGSDTSMRPPW 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1183g00001 104 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 104 - -
Sebi1183g00001 104 SUPERFAMILY Pectin lyase-like 1 104 IPR011050 -
Sebi1183g00001 104 Pfam Pectinesterase 1 104 IPR000070 GO:0030599|GO:0042545
Sebi1183g00001 104 Gene3D - 1 104 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1183g00001 Sebi-Chr1183 11425 11852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1183g00001 15 104 Carbohydrate Esterase AT1G05310 44.444 6.67e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1183g00001 - - mtr:11434724 147.902