Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00148 ATGTATCCAAGATTGATACACCCTCACGAAGGGATTGTTGGGCAGGAAGATATGCAAGGTGGGGGTGCCTCTAACCACAAGGGAGACCCATGTCTTGTTTTGACGGCTGATCCAAAACCTCGCCTTCGTTGGACTCAGGACCTCCATGAACGATTCGTTGATGCAGTCACCCAGCTTGGGGGTGCTAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGAATATCAGGTTCATATCTTTTAGAAAGCCCTGGTACTGATAATACTTCTCCAAAGTTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATTTGCAAGTGGAGGCAGAGAAGCACCTGCAGATTCGCCAGGAAGCTGAGCGAAGATATATGGCCATGCTTGAAAGAGCCTGCAAGATGCTGGCTGATCAATTTCTTGGTGCTACAGTTATAGACACAGATAGCCAAAAGTTTCAAGGAATTGGAAGTAAAGCACCAAGAAGTTCCATGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCTGCTGAGGTGGCTGGAGTGAATGTCCCAGAAGAAGAAATACCACCAAGTCTCCCACCCCAAAGGGCTGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAGAGTTCTGGTGGATTGACTCTAGAAGGATCTCCAGGTGGGGGCAAAAGGAGGATGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGACTGAAGCTAAGATGAAAACTCAAGCCATCAATGTAGCCCATGGAAATTCTCATGGAATAACTAGGTACTTAAACTCTGACATCTTCTTCATGTCTAGTAAGTTAGTGGGAGCAAATGTGGAATCAATTTTACCCATTTTGTAA 1005 0.4458 MYPRLIHPHEGIVGQEDMQGGGASNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGISGSYLLESPGTDNTSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQEAERRYMAMLERACKMLADQFLGATVIDTDSQKFQGIGSKAPRSSMVDPLGFYSLPSAEVAGVNVPEEEIPPSLPPQRADCSTESCLTSHESSGGLTLEGSPGGGKRRMLGMDSMAAPLIWTEAKMKTQAINVAHGNSHGITRYLNSDIFFMSSKLVGANVESILPIL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00148 334 MobiDBLite consensus disorder prediction 235 274 - -
Sebi117g00148 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Sebi117g00148 334 MobiDBLite consensus disorder prediction 1 27 - -
Sebi117g00148 334 MobiDBLite consensus disorder prediction 110 132 - -
Sebi117g00148 334 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Sebi117g00148 334 MobiDBLite consensus disorder prediction 244 262 - -
Sebi117g00148 334 Gene3D - 38 96 - -
Sebi117g00148 334 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Sebi117g00148 334 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Sebi117g00148 334 FunFam Myb family transcription factor 38 96 - -
Sebi117g00148 334 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Sebi117g00148 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 263 IPR044848 GO:0003700
Sebi117g00148 334 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00148 Sebi-Chr117 1849877 1855771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00148 24 255 G2-like Transcription Factor Family AT3G24120 44.628 6.20e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi117g00148 Myb_DNA-binding 5.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00148 - - gmx:100782369 555.058