Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00147 ATGCATGGTCAGCACATAGATTGTGGTGGCAACACAATGGATCCTGGCAATGGAGGAAACAGTGTCACCAACAATTCTAATCACGCCTCAAAACAGCGTTTACGGTGGACACATGAGCTACATGAACGCTTTGTTGATGCTGTGGCTCAACTTGGCGGACCAGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACCATTTACCATGTCAAAAGCCATTTACAGAAATACCGGCTAGCAAAATACCTACCTGACTCCTCATCTGATGAAGGGAAAAAAGCTGACAAGAAAGAAACTGGGGATGTGCTTTCCAATCTGGATGGTTCTTCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGATTACATGAACAATTGGAGGTGCAGAGACAGCTACAGTTGAGGATAGAAGCCCAGGGTAAATACTTGAAAAAGATAATTGAAGAGCAACAGCGGCTCAGTGGGGTTCTTTCAGAGGCACCTGGCTCTGGGGTTGCAGCCCCAGTTCCAGGAGATGCGTGCCAAGAACTTGATAATAAGACTGACCCGGCAACCCCAGACCCAGAAAAAGCTGCCAAAGATCGTGTGCCAGCAAAGAGTCTCTCAATTGAATCATTTTCATCTCACCAAGAACCGTTGACACCAGATTCTGGTTGCCATGTTGGTTCCCCTGCTGAAAGCCCTAAAGGGGAGAGATCAACTAAGAAGCAGAGAGTAAGCATGGAGGGAACATATTCTAAACCAGACATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATCATACCAGCAACCAAACACTGTTTTCCTTACCCAACAACACTTTGATGCTTCTTTGGGTATATCTACCAGAAGTGCTGAGGAATTGGAGAAGGTTGGTGGTAGTAATCTGTGA 936 0.4647 MHGQHIDCGGNTMDPGNGGNSVTNNSNHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGVAAPVPGDACQELDNKTDPATPDPEKAAKDRVPAKSLSIESFSSHQEPLTPDSGCHVGSPAESPKGERSTKKQRVSMEGTYSKPDMVLPHQILESSMSSYQQPNTVFLTQQHFDASLGISTRSAEELEKVGGSNL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00147 311 MobiDBLite consensus disorder prediction 90 114 - -
Sebi117g00147 311 MobiDBLite consensus disorder prediction 14 31 - -
Sebi117g00147 311 Coils Coil 121 141 - -
Sebi117g00147 311 Pfam Myb-like DNA-binding domain 34 84 IPR001005 -
Sebi117g00147 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 31 86 IPR006447 GO:0003677
Sebi117g00147 311 FunFam Myb family transcription factor 30 88 - -
Sebi117g00147 311 MobiDBLite consensus disorder prediction 170 259 - -
Sebi117g00147 311 MobiDBLite consensus disorder prediction 1 31 - -
Sebi117g00147 311 MobiDBLite consensus disorder prediction 90 108 - -
Sebi117g00147 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 88 IPR017930 -
Sebi117g00147 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 27 302 IPR044848 GO:0003700
Sebi117g00147 311 MobiDBLite consensus disorder prediction 194 209 - -
Sebi117g00147 311 Gene3D - 30 89 - -
Sebi117g00147 311 Pfam MYB-CC type transfactor, LHEQLE motif 118 164 IPR025756 -
Sebi117g00147 311 SUPERFAMILY Homeodomain-like 30 85 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00147 Sebi-Chr117 1839799 1842574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00147 66 311 G2-like Transcription Factor Family AT2G01060 64.314 1.86e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi117g00147 Myb_DNA-binding 2e-08 CL0123