Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00127 ATGAGCGAAGGGCCATGGTCGTGGAGACGCAGTGGACGTGTTAGGGTTTTGGAGAGAGGGTCCCAGTGGTTAGGTGCCATCATGAAGAGGCCATGGCTGCACACTGCTTTCTCCAATCGAAATGGCTCTGTTTCTGATACTGCAGCTGCAGCTATTCCCAATGGAAGTTCCATTTCGAACCATGTTGGTAATGGAGAACTTTCTATTTCTAGCTTACCGCAATTAGGTTTACAAGTGTGTTTTCCTAGCTCCTCCATTCTGCCATTCTTCCTTCTTCTATTCTACTGCATTGATATTAGTATGCTCTGTTTCTCCGGGAAACGGTTGATCATGGGTGAAAGATATCTAGCATTCCTACTACTCATTTTCAGTTACTTTTTTATTGCGGTAGCAGATAAAGCATCGCAGGATTACAATGTTATGCTGACTTTGAAGTTTGAGTGGGAGAACACATCACCACCTATTTGGGTGGGCACAGATCCTTGTGGTGATGATGGTTGGGTGGGCATTAAGTGCTTCAATTCACGCGTTACCAGCATAACATTAGCAAGCATGAATTTGTCTGGCAAGCTTCCTTCAGATATTGGATTACTATCTGAATTGCAGATTTTATTTCTTATTAATTGTGGTTTCACTGGTCCTATCCCAAATACAATAGGAAATCTAAAACGGCTTGTCTTCCTATCTTTAAATAAAAATAGCTTCAGTGGGCGAATTCCTCCTGATATTGGTAAGCTCTCTAATCTTAATTGGCTGGACTTAGCTGAAAACAAGCTCGAGGGGCCCATCCCAATATCTAATGGAACTACTCCTGGTCTTGATATGTTGCACCGTACAGAGCACTTACTCTTTGAAGGTAACAGACTTACTGGTGTGATTCCATCTACACTTGTACTTGTCCAGTCTCTGGAGGTGGTGCGCTTCGATGGTAATATTTTAAGTGGACCTTTACCTGTGAACCTCAACAATCTTACAAAAGTTCAGGAGTTGTTCCTGTCCAAAAATCGCCTATCTGGTCCCCTGCCAAACCTTACTGGAATGAATGTCCTCAGCTACCTAATGATGGATAAGACACAACTTCAAGGACAAATTCCTGTTTCTTTGTTCAGCCAGCTGGAACTGTTGCAGACAGTGGTGCTGAGAGACAACCGGCTGAATGGCACTTTAGATATTGGCACAGCCATGAGTAACGAACTGGTACTCCTTGATTTGCAGAAAAATTTAATTGAAGAATTTGCTCCAAAAATTGATGTCTCCAAAGTGGAGATAATACTTGCGAAAAATCCAGTTTGCCAAGACACAGGAGTTGTACGGACTTATTGCTCCATTGCAAAATCCAATGACTCATACAAAACACCACCGAATAACTGTGTGCCTGCTACCTGTAGCTCAGATCAGATATTAAGTCCCCACTGCAAATGTGCATACCCATATACAGGAACTTTAACTTTCAGAGGTCCTTCCTTCTCAGGCTTGGGAAATGATACTGTCTTTGTAAACCTGGAGTTATCTCTGATGCAGTCTTTTCAACTTTATGAAACACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAAGGATGTAGACAGAATTCAGTATCTTGAGTTGACTTTACAAGTATTTCCATCAGGCCAAGATCGTTTCAATCGATCTGGGATTTCTGGTATAGCCTTTCTGCTTAGCAACCAGACATATAAGCCTCCTGCAATGTTCGGACCATATTATTATATCGCTGATACTTATGAACACTATTTGGATGACTTAGGTCCTGTAGCATCCAGTAAATCTTCAAATATTGGCATCATAGCTGGAGCTGCTGCTGGTGGTTCTGTCCTGCTGGTGTTATTACTCCTTGCAAGTGTTTATGCTTTCCGCCAAAAGAAAAAAGCAAAAAGAGCAACTAGTAAACGCAATCCTTTTGAACAATGGGATCCGGATGAGAGCAACAGTAGCACCCCACAGTTAAAAGGAGCAAGACGCTTCACTTTTGAAGAGATGCAGAACTACACCAAAAACTTTTCACAAGTCAACAATATAGGATCTGGGGGTTATGGGAAGGTTTATCGAGGAACTCTTCCCAATGGAGAACTAATTGCAGTAAAACGAGCTCAAAAAGAATCAATCCAGGGAGGACTAGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCACAAAAATCTTGTTAGCCTTCTCGGTTTCTGCTTTGAGCAAGGAGAACAAATGCTGGTTTATGAGTATGTTGCAAATGGCACTTTGAAGGATGCTCTATCAGGGAAATATATTGTGAAACTGGTTAAGAGTGCTATTGACAAGACAAAAGACATATATGGTCTGAAGGAAATTCTTGATCCAACCATTGATTTAGGGACAACACTGAATGGTTTTGATAAGTTTGTGGATCTGGCATTGCAATGTGTTGCAGAGTCAAGTTCTAACAGGCCTTCAATGAATTACGTGGTGAAAGAAATTGAAAACATGTTGCATTTGGCTGGTTCAAACCCCAATGCTGAATCAGCATCTAGTTCATCTAGTTATAATGTAAGTAAAGGGACCCTGCATCCTTATGACAATGAGTACTTTGGTTCAAGTGTGCTACTTCCACGTGCATAA 2616 0.4144 MSEGPWSWRRSGRVRVLERGSQWLGAIMKRPWLHTAFSNRNGSVSDTAAAAIPNGSSISNHVGNGELSISSLPQLGLQVCFPSSSILPFFLLLFYCIDISMLCFSGKRLIMGERYLAFLLLIFSYFFIAVADKASQDYNVMLTLKFEWENTSPPIWVGTDPCGDDGWVGIKCFNSRVTSITLASMNLSGKLPSDIGLLSELQILFLINCGFTGPIPNTIGNLKRLVFLSLNKNSFSGRIPPDIGKLSNLNWLDLAENKLEGPIPISNGTTPGLDMLHRTEHLLFEGNRLTGVIPSTLVLVQSLEVVRFDGNILSGPLPVNLNNLTKVQELFLSKNRLSGPLPNLTGMNVLSYLMMDKTQLQGQIPVSLFSQLELLQTVVLRDNRLNGTLDIGTAMSNELVLLDLQKNLIEEFAPKIDVSKVEIILAKNPVCQDTGVVRTYCSIAKSNDSYKTPPNNCVPATCSSDQILSPHCKCAYPYTGTLTFRGPSFSGLGNDTVFVNLELSLMQSFQLYETPVDSVSLSNPRKDVDRIQYLELTLQVFPSGQDRFNRSGISGIAFLLSNQTYKPPAMFGPYYYIADTYEHYLDDLGPVASSKSSNIGIIAGAAAGGSVLLVLLLLASVYAFRQKKKAKRATSKRNPFEQWDPDESNSSTPQLKGARRFTFEEMQNYTKNFSQVNNIGSGGYGKVYRGTLPNGELIAVKRAQKESIQGGLEFKTEIELLSRVHHKNLVSLLGFCFEQGEQMLVYEYVANGTLKDALSGKYIVKLVKSAIDKTKDIYGLKEILDPTIDLGTTLNGFDKFVDLALQCVAESSSNRPSMNYVVKEIENMLHLAGSNPNAESASSSSSYNVSKGTLHPYDNEYFGSSVLLPRA 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00127 871 MobiDBLite consensus disorder prediction 633 655 - -
Sebi117g00127 871 PANTHER RECEPTOR-LIKE PROTEIN 55 152 760 - -
Sebi117g00127 871 SUPERFAMILY Protein kinase-like (PK-like) 647 763 IPR011009 -
Sebi117g00127 871 ProSiteProfiles Protein kinase domain profile. 673 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi117g00127 871 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
Sebi117g00127 871 SUPERFAMILY L domain-like 165 409 - -
Sebi117g00127 871 FunFam Nuclear pore complex protein NUP107 134 280 - -
Sebi117g00127 871 Gene3D Phosphorylase Kinase; domain 1 643 745 - -
Sebi117g00127 871 Pfam Protein tyrosine and serine/threonine kinase 676 761 IPR001245 GO:0004672|GO:0006468
Sebi117g00127 871 Gene3D Ribonuclease Inhibitor 134 434 IPR032675 -
Sebi117g00127 871 FunFam Leucine-rich repeat protein kinase family protein 637 748 - -
Sebi117g00127 871 Gene3D Transferase(Phosphotransferase) domain 1 746 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00127 Sebi-Chr117 1599056 1631521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00127 760 871 Receptor kinase-like Gene Family AT5G49760 50.000 1.14e-24 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Sebi117g00127 PK_Tyr_Ser-Thr 8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00127 - - gmx:100782366 876.7