Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00124 ATGTCCAATACCACTAAGCTTGTACTTGGTTTGCTTGTTCTCTTTAGTTCTTTGCTTGTTCCCTTTGCAGAGGTTTGCCCAAGGAGTTTTAACTGTGGAGTCCTCGGGGAGTTGTCCTTCCCATTCACCAATTCACCAAACTCACAATGTGGTTTGTATGTAAGGGGATGTGATGATCAAGGTGGAGCCATAGATGTTCATTTGGGAGATGAAGATGAAAATGAAAACCTAACATGGCTTGAAATTGAAAGCATAGGCAACGCCTCTCAAATTACTTCGCTCCATGTCAGAAGTCGTCAGCTTGACAAGAAGATGCGAGACTCCTCCAGAGATTGCAGAATGGAAGATTACAATATTACCCTTCCCCCAGCGACTCCTATAATGTCATTTGAGAAGGAATTTCAATACACACTGACTCTGTGTAGGTGCAACCGAAGCCTCGACATCACTCCCCCTGAATACTTTCAGAACAATGAAGTTCTACTCTGTGGTGAATTTTTGGAGTATTACCTCTACTATGGTCTCTTAATAGGTGATGCGCTTCCTAGTGCTTTCAATTCATGCACAATTGCCCAAATTCCAGCTAATTCTGTACCTATTTCCCAATTAAAAACATCCTATACCACTGAATTTACCTTAAAAGTAACATTGTCTGAGGATTGTTACAAATGTTTCTATGAAAGCGGTGGCCAATGTCGACTTGACAACAAAGGGAATTTTTCTTGTGTTTTTCAAGATCATCAACGTGGGTCCGTGAATGTGCTTGTGGTGGCAACAGCTACTTCAGCTGCTCTGGTTGCAATAATGCTTATGGTCTTGGTATGCTGTTTAAGAAGAAAAGTCACCTCTACATCTATTTTGTTTTGGAAGGGTGAAAATCCAACCCATCAAAACATTGAGATCTTTTTGAAGACACATGAATTCCTTTTAACTAAAAGGTACACTTATTCTGAGATAAGACAGATGACTGACTCCTTCAAAAACAAACTAGGCCAAGGGGGTTATGGAAGTGTATACAAAGGAAAATTACCTGATGGAAGACTTGTTGCAGTGAAGGTTTTAAATGAGTTAAAAGGTAATGGTGAAGAATTCATCAATGAAGTTGCAAGTATCAGCCAAACTTCTCATGTTAACATAGTTAGTCTCTTTGGATTTTGTTTTCAAGGTTCAAAGAGAGCTCTAGTTTATGAATTCATGCCTAATGGTTCACTTGAAAAGTTTACATATGAAGAGAATGATGCAATGGTTGATCGCCAATTGGATTGCAAGACTTTACATGACATTGCAATTGGTACTGCTAGGGGTTTAGAGTATCTACACAGAGGTTGTAACACTAGAATCCTACATTTTGACATCAAACCTCACAATATATTACTTGATGCAGACTTTTGTCCAAAGATTTCAGATTTTGGACTTGCAAAAATATGCACAAGAAAGGAGAGTATTGTTTCCTTGTGGGGTACAAGAGGAACTGCAGGGTATATTGCTCCTGAGGTATTTTCTAGAAATTTTGGGGCTGTGTCACATAAATCAGATGTTTATAGTTTTGGAATGATGGTTTTAGAAATGGTTGGAGGAAGGAAAAAGGGTAGTCATGTGGAAGTTGAGAGTTCTAGTGAAATGTATTTTCCAAATTGGATTTACAAATGCATAGAATTAAATCAAGAACTTGAATTGAGATGTATTAAAAGTACAAATGATTATGCGGTGGCAAAGAAAATGATTGTGGTAAGCTTGTGGTGCATACAAACCGACCCATCAGCTCGGCCAGCTATGAGTAAAGTGGTGGATATGTTAGAAGGAAGCCTTGAGTCATTGGAAATTCCACCCAAACCTTTTTTATCTTCGCCAAAAACATCTCCAGCTCAATATTAG 1875 0.3867 MSNTTKLVLGLLVLFSSLLVPFAEVCPRSFNCGVLGELSFPFTNSPNSQCGLYVRGCDDQGGAIDVHLGDEDENENLTWLEIESIGNASQITSLHVRSRQLDKKMRDSSRDCRMEDYNITLPPATPIMSFEKEFQYTLTLCRCNRSLDITPPEYFQNNEVLLCGEFLEYYLYYGLLIGDALPSAFNSCTIAQIPANSVPISQLKTSYTTEFTLKVTLSEDCYKCFYESGGQCRLDNKGNFSCVFQDHQRGSVNVLVVATATSAALVAIMLMVLVCCLRRKVTSTSILFWKGENPTHQNIEIFLKTHEFLLTKRYTYSEIRQMTDSFKNKLGQGGYGSVYKGKLPDGRLVAVKVLNELKGNGEEFINEVASISQTSHVNIVSLFGFCFQGSKRALVYEFMPNGSLEKFTYEENDAMVDRQLDCKTLHDIAIGTARGLEYLHRGCNTRILHFDIKPHNILLDADFCPKISDFGLAKICTRKESIVSLWGTRGTAGYIAPEVFSRNFGAVSHKSDVYSFGMMVLEMVGGRKKGSHVEVESSSEMYFPNWIYKCIELNQELELRCIKSTNDYAVAKKMIVVSLWCIQTDPSARPAMSKVVDMLEGSLESLEIPPKPFLSSPKTSPAQY 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00124 624 Pfam Protein kinase domain 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi117g00124 624 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Sebi117g00124 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Sebi117g00124 624 ProSiteProfiles Protein kinase domain profile. 324 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi117g00124 624 Gene3D Transferase(Phosphotransferase) domain 1 399 607 - -
Sebi117g00124 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 290 616 IPR045874 GO:0004672
Sebi117g00124 624 FunFam PR5-like receptor kinase 399 611 - -
Sebi117g00124 624 SUPERFAMILY Protein kinase-like (PK-like) 304 600 IPR011009 -
Sebi117g00124 624 FunFam serine/threonine-protein kinase PBS1-like 295 398 - -
Sebi117g00124 624 Gene3D Phosphorylase Kinase; domain 1 300 398 - -
Sebi117g00124 624 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00124 Sebi-Chr117 1576788 1578935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00124 262 615 Receptor kinase-like Gene Family AT4G18250 52.747 4.79e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sebi117g00124 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00124 - - gmx:100785979 591.267