Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00107 ATGCTATCTTCGAATGTTGTTCCATCATCATCCTCTGTCACTTTCAGCAAACCCAATCACCAGTTTTTCATTAATGCATCTCCCATTTTCAAACCAAATCTTCTCTGCAGGTTTCAGGCCCAACAGAATCTACACTGCTGCAGAGCCACCTCTCAGCTTCATGAATCAGGCCTCAAAAGTTCCAAACTTTCTCTCATGCCCACATCCCAGATCCAACATTCAATCACAAATTTAAGCTCTTTTAACAGATTCCTCTCACACCCATTTGAGTTCTCAGCAAAACCCAGACTCCAAATCGTTAAGGCAGCATCTGATGCTAATCCTGAGGGAGAAAGTGTAGCTCCCACTAATCCCAAGTCTAAGAATTTCAAACTTGCACTTGTATTTGGGATGTGGTATTTCCAAAACATTGTTTTCAACATTTACAACAAGAAAGCGTTAAACATATTCCCATTCCCATGGCTTCTTGCCTCTTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTCTGGTCCTTTAAGCTTCAACCTTGTCCAAAAATCTCAAAACCTTTCATCATGGCTCTCCTTGGTCCTGCTTTGTTCCACACAATAGGCCACATATCAGCTTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTCACCCATGTCATTAAATCTGCAGAACCAGTTTTCTCTGTCATTTTTTCTTCTGTCCTTGGTGATAGATATCCCATTCAGGTTTGGCTTTCAATTCTACCTATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCTCTCATTAGCAATGTTGGTTTTGTATTGAGGAACATCTATTCTAAAAGAAGTTTACAAAGTTTCAAGGAAGTTGATGGCTTGAACTTATATGGCTGGATTACTATAATTTCATTGCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGATCCCAGTGGATCCCAGGGTATTACAAGGCAATTGAAGCTATAGGCAAACCATCCACATTTTATATATGGGTGTTGGTGTCTGGGGTGTTCTACCATCTCTATAACCAATCATCTTACCAAGCCCTGGATGAAATTAGCCCATTAACTTTCTCTGTTGGAAACACAATGAAGAGAGTGGTGGTGATTGTATCTTCAGTTTTGGTGTTCAGGAATCCAGTTAGACCACTTAATGGCCTTGGATCTGCCATTGCCATTCTTGGGACTTTCCTGTATTCCCAGGCAACATCTGCAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1293 0.4099 MLSSNVVPSSSSVTFSKPNHQFFINASPIFKPNLLCRFQAQQNLHCCRATSQLHESGLKSSKLSLMPTSQIQHSITNLSSFNRFLSHPFEFSAKPRLQIVKAASDANPEGESVAPTNPKSKNFKLALVFGMWYFQNIVFNIYNKKALNIFPFPWLLASFQLFVGSIWMLVLWSFKLQPCPKISKPFIMALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQSFKEVDGLNLYGWITIISLLYLFPVAIFVEGSQWIPGYYKAIEAIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATSAKKAKKIEGEKSS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00107 430 Pfam Triose-phosphate Transporter family 124 413 IPR004853 -
Sebi117g00107 430 PANTHER SOLUTE CARRIER FAMILY 35 124 419 - -
Sebi117g00107 430 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 414 - -
Sebi117g00107 430 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 124 423 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00107 Sebi-Chr117 1384932 1386224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00107 24 428 Antiporters AT5G17630 69.451 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00107 K15283 - gmx:100101869 730.709