Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00092 ATGGGTTCGATGATGCGTGTATTGGTAGCACTTTGGTGTGCAACATTAACAGTCTCAAATGCTGAGTTGAGTACCACGTTTTACAGTGAAACATGTCCATCTCTGAATGATATTGTGTTTGATAATATCTTCCAGACTTCCCTCTCTGATCCCCGCATCGGTGCCAGCCTCATCAGACTTCACTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTTTTATTGAACAACACTGCTACAATAGAAAGCGAGCAAGATGCGTTGCCAAATATAAACTCATTGAGGGGTTTGGATGTCATCAATAACATCAAGACAGCAGTGGAAGCTGATTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTTCAGCTCAAGTGGCCTCTGTTTTGGGAGGAGGTCCCTCATGGGCAGTTCCACTAGGAAGAAGGGACAGCTTAACAGCAAACAGAACCCTTGCAAATCAAAATCTTCCAGCACCTTTCTTCACATTGGATCAACTTAAAGATGCCTTTTCTGTTCAAGGTCTCAACACTCTTGATTTAGTCACACTCTCAGGCGCCCATACATTTGGAAGAGCTCACTGCAGCACATTCAATAATCGATTATACAATTTTAGTGGCACTGGAAATCCTGATCCAACTCTAGACACAAGTTACTTAGAAGTATTGCGTGAGATATGCCCTGAGAATGCAACAGAGAACAACCTCACTAATTTGGACCTGACCACACCTGATCAATTTGATAATAATTACTACTCCAATCTTCAGAGCCAGAAGGGGTTACTTCAGAGTGACCAAGAGCTATTCTCCACTCCTAATGCTGATACCATTGACATTGTGAATAGTTTCAGCAGTGACCAAGATCTCTTCTTTGACAACTTTATAGAATCAATGATAAAAATGGGTAACATTGGAGTGATAACAGGGGATGAAGGAGAAATTCGATTGCAATGTAATTTTGTGAATGGGGATGATGGCTCCTCTAGTATTGTTGCATCCAGAGATTCAAAAGATGTTCTAGTTAGCTCAATCTAA 1041 0.4121 MGSMMRVLVALWCATLTVSNAELSTTFYSETCPSLNDIVFDNIFQTSLSDPRIGASLIRLHFHDCFVQGCDGSVLLNNTATIESEQDALPNINSLRGLDVINNIKTAVEADCPATVSCADILAISAQVASVLGGGPSWAVPLGRRDSLTANRTLANQNLPAPFFTLDQLKDAFSVQGLNTLDLVTLSGAHTFGRAHCSTFNNRLYNFSGTGNPDPTLDTSYLEVLREICPENATENNLTNLDLTTPDQFDNNYYSNLQSQKGLLQSDQELFSTPNADTIDIVNSFSSDQDLFFDNFIESMIKMGNIGVITGDEGEIRLQCNFVNGDDGSSSIVASRDSKDVLVSSI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00092 346 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 Gene3D - 27 324 - -
Sebi117g00092 346 FunFam Peroxidase 160 303 - -
Sebi117g00092 346 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Sebi117g00092 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Sebi117g00092 346 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 CDD secretory_peroxidase 22 323 IPR033905 GO:0004601|GO:0042744
Sebi117g00092 346 Gene3D Peroxidase, domain 2 160 303 - -
Sebi117g00092 346 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 PANTHER PEROXIDASE 72-RELATED 18 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00092 346 FunFam Peroxidase 26 169 - -
Sebi117g00092 346 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00092 Sebi-Chr117 1199312 1202492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00092 2 325 Peroxidase AT5G06720 58.333 9.17e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00092 K00430 - gmx:548068 517.694