Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00089 ATGAGCTCACTTCGTGTCACATTAACAGGTCTATGCTGTGTATTGGTTGTGGTAATTGGAGCACTTCCTTTTCCTTCAAACGCACAGCTTGATCCGTCGTTTTACAGGAATACATGTCCGAAGGTGCATTCAATTGTACGCGAAGTCGTGAGGGCAGTTTCAAAGAAAGATCCCCGTATGCTTGCCAGTCTCGTTAGGCTTCACTTCCATGATTGTTTTGTTCAAGGCTGTGATGCATCCATTTTGTTGAACAACACCGCTACAATCGTGAGCGAACAAGAAGCTTTTCCAAATAACAACTCCATAAGAGGTTTGGATGTTGTGAACCAGATCAAGACAGAAGTAGAAAAAGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCTGCTGAAATATCTTCCGTTCTGGCACACGGTCCTGATTGGAAAGTTCCTCTGGGAAGAAGGGATAGTCTAACAGCAAACCGAACCCTTGCTAATCTAAATCTTCCAGGTCCTTCCTTCAGTCTTGATCAACTTAAAAAAGCCTTTTCCGATCAACGCCTTGACACTACCGATCTAGTTGCACTCTCTGGTATGTCTCACTGCTCTTTATTCCAAGACCGATTGTACAATTTCAACAGCACTGGCAAACCCGACCCAACTCTTGATACAACTTACTTACAAGAATTGCGTAAAATTTGCCCCAATGGTGGATCTGGCACTAACCTTGCCAATTTTGACCCAACCACTCCTGATACACTTGATAAGAACTATTACTCCAATCTTCAAGTTAAAAAGGGGTTGCTTCAAAGTGACCAAGAGTTGTTTTCAACACCCCGTGCAGATACCATTAACATTGTCAACAAGTTCGCTAGTAGCCAAGATGCTTTCTTTGAGAGTTTTAAGGCTTCCATGATTAAAATGGGTAATATTGGTGTCCTAACTGGGAACAAAGGAGAAATCCGAAAACATTGCAATTTTGTTAACAAGAAATCTGTTGAAGAAGATCTAGCTAGTGTGGCCTCTGAGGAATCATCAGAGGAGCGTATGGTTAGCTCAATCTAA 1056 0.4214 MSSLRVTLTGLCCVLVVVIGALPFPSNAQLDPSFYRNTCPKVHSIVREVVRAVSKKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQEAFPNNNSIRGLDVVNQIKTEVEKACPNTVSCADILALAAEISSVLAHGPDWKVPLGRRDSLTANRTLANLNLPGPSFSLDQLKKAFSDQRLDTTDLVALSGMSHCSLFQDRLYNFNSTGKPDPTLDTTYLQELRKICPNGGSGTNLANFDPTTPDTLDKNYYSNLQVKKGLLQSDQELFSTPRADTINIVNKFASSQDAFFESFKASMIKMGNIGVLTGNKGEIRKHCNFVNKKSVEEDLASVASEESSEERMVSSI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00089 351 Gene3D Peroxidase, domain 2 167 305 - -
Sebi117g00089 351 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 Gene3D - 34 326 - -
Sebi117g00089 351 FunFam Peroxidase 33 178 - -
Sebi117g00089 351 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PANTHER PEROXIDASE 72-RELATED 27 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 FunFam Peroxidase 167 305 - -
Sebi117g00089 351 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Sebi117g00089 351 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi117g00089 351 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00089 Sebi-Chr117 1170643 1172401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00089 26 339 Peroxidase AT2G38380 54.348 2.82e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00089 K00430 - gmx:112997600 517.309