Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00073 ATGGCTAACTACTACTCCCACCCTCATATCTGTCAATGCCTTAGTCAATTGATAACCTACCGGCGACACTTTCCGGTGATGATCGCCGGCCACCGCCGCAAGACTGGTCAACAGTTTGTGGAGGAAGTATTGTCCCTGGCACGAGGCCTTCTCCAGCTAGGAGTCACACCCGGTGATGTGGTTGCCATCTCTGCTTACAACAGTGATTGGTATCTGGAGTGGTTGTTAGCCATTGCATTTGTTGGAGGAATAGTTGCTCCTCTGAACTATCGCTGGAGTTTTGAAGAGGCAAAATTAGCAATGACTGCTGTGAGGCCAGTGATGTTAGTGATTGATGAGAGCTGCTATGAATGGTACTTAAAACTCCAACAAAATGATATTCCATCTCTGAGGTGGCATGTTTTGTTGGATTCCCCTTCCTCAGATTTTACAAAGAAGTGGAATGTGTTAACTCCAGAAATGCTCAAGAAGCATCATGTCAAATCTCTAGAATTTAATTACTCATGGGCACCTGAAGGCGCTGTCATAATATGCTTTACTTCAGGAACTACAGGAAAGCCCAAGGGAGTCACCCTAAGCCATGGAGCTTTGATCATACAATCCCTAGCCAAGATTTCCATAGTTGGGTACAGTGAGGATGATGTCTATCTCCATACTGCTCCATTATGCCATATTGGGGGCTTGTCATCAGCCATGACCATGCTTATGGTTGGAGGTTGCCATGTATTTATGCCAAAGTTTGATGCAAAATCAACTGTAGCTGCCATTGAGCAATATAATGTGACATCTTTTATCACTGTTCCTGCAATAATGGCCAGTCTGATTTCTGTAGTTAGGCACAAAGAAACCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAAGACACTAGCATATTCTTCCATAAAGCTAAGCTTATTTCAGCTTATGGGATGACAGAGGCATGCTCTTCATTGACATTCCTGACACTCTATGACCCAATGCACAAAACCACTAGCCAGCCCCTTCAAAAATATGGTGAGGCAAGACCCAATCTCATTCATCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCCCATGTAGAATTGAAAATATGTGCAGATGCCTCTAGTCACATTGGGAGAATTTTAACTAGAGGACCACATTTAATGCTCAAGTATTGGGATCAAATCCTCACAAACCCATTAAATCAGAGGAATGAAGTGTGGCTTGACACAGGTGACATTGGATCAATTGATTCAAATGGTAATTTGTGGCTCCTTGGAAGAACAAACGGCCGTATCAAGAGTGGTGGAGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACTAGAACATCCAGGGATTGCAAGTGTTGTTATTGTGGGAATTCCAGATGCTCGTTTGACAGAGATGGTAGCAGCATGTATCCAACTTAGAGAAAATTGGCAATGGTGTGATCACTCTACTTCAAATGAAGAGTTTCACCTATCTAGAAAGAATCTCCAGCAATACTGTATAGAAAATAATTTAAGCAGGTTTAAGATACCGAAGACATTTATTGAATGGAGGAAACCTTTTCCACTCACTACCACAGGAAAAATAAGAAGAGACCAAGTCCGAAAGGAAGTTATGTCTCAGCTACAATCTTTGCACAGTAATCTTTGA 1686 0.4282 MANYYSHPHICQCLSQLITYRRHFPVMIAGHRRKTGQQFVEEVLSLARGLLQLGVTPGDVVAISAYNSDWYLEWLLAIAFVGGIVAPLNYRWSFEEAKLAMTAVRPVMLVIDESCYEWYLKLQQNDIPSLRWHVLLDSPSSDFTKKWNVLTPEMLKKHHVKSLEFNYSWAPEGAVIICFTSGTTGKPKGVTLSHGALIIQSLAKISIVGYSEDDVYLHTAPLCHIGGLSSAMTMLMVGGCHVFMPKFDAKSTVAAIEQYNVTSFITVPAIMASLISVVRHKETWKGGETVKKILNGGGSLSLELIKDTSIFFHKAKLISAYGMTEACSSLTFLTLYDPMHKTTSQPLQKYGEARPNLIHQPQGVCVGKAAPHVELKICADASSHIGRILTRGPHLMLKYWDQILTNPLNQRNEVWLDTGDIGSIDSNGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIASVVIVGIPDARLTEMVAACIQLRENWQWCDHSTSNEEFHLSRKNLQQYCIENNLSRFKIPKTFIEWRKPFPLTTTGKIRRDQVRKEVMSQLQSLHSNL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00073 561 CDD AFD_class_I 177 542 - -
Sebi117g00073 561 Pfam AMP-binding enzyme 25 442 IPR000873 -
Sebi117g00073 561 Gene3D - 438 554 IPR045851 -
Sebi117g00073 561 PANTHER ACYL-COA SYNTHETASE 31 553 - -
Sebi117g00073 561 SUPERFAMILY Acetyl-CoA synthetase-like 9 555 - -
Sebi117g00073 561 ProSitePatterns Putative AMP-binding domain signature. 177 188 IPR020845 -
Sebi117g00073 561 Gene3D - 3 437 IPR042099 -
Sebi117g00073 561 Pfam AMP-binding enzyme C-terminal domain 451 540 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00073 Sebi-Chr117 928777 934575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00073 43 556 Monolignol Biosynthesis Gene Families AT4G19010 26.642 5.16e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00073 K14760 - gmx:100809925 959.133