Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00058 ATGCCCATACCCAAACAAAGCTCAACAACGTCAATTGGCTATGAGGTTGGAATTGAACCCAAACAAATTAAGTTTTGGTTTCAGAACAAAATGACTAAAATAAAGATTCAAAGCAAGCCAGCAAATAACACTACTCTTCGAGTTAAGAAGGATATGATGCTTAATGAAAACCTCCAAATGAAAGAGGTATTAGAGAATATAATTTGCCAAGATTGTGGGGGTCCACCGTTACTTGAAGAAGAGCATGAAAGTTTCATGCGAAAAATGCAACTTGAAAATAGAAGGCTAAAAGAAGAGCATGGGAAGGTGTCTAACCTTATTGCAAGGTACTTAGAGAAATATATGTCAACACCTAGGTTGAAGCAAGTTCCTATCCCTATCACTGAATCTTCTTCACATGAGCCTGCACTCGATGGAAGTTCAAGTACATCTCTTGATCCAAATCTTGGTTTTCACAACCCAATGGAATTTTCTAATATGGAAAAGGCATTGATGTATGAGATTGCAACTTCTGCAATGGAAGAACTAATTAAGCTTTTGCGCATTAATGAGCCTTTTTGGGTCAACTCATCAGCTCAAGATGGGGAACTCACCCTTCATCGTGAAACTTATGAAAAAATTTCCCGCAGACTAATCACTTGA 642 0.3785 MPIPKQSSTTSIGYEVGIEPKQIKFWFQNKMTKIKIQSKPANNTTLRVKKDMMLNENLQMKEVLENIICQDCGGPPLLEEEHESFMRKMQLENRRLKEEHGKVSNLIARYLEKYMSTPRLKQVPIPITESSSHEPALDGSSSTSLDPNLGFHNPMEFSNMEKALMYEIATSAMEELIKLLRINEPFWVNSSAQDGELTLHRETYEKISRRLIT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00058 213 Coils Coil 79 99 - -
Sebi117g00058 213 ProSiteProfiles 'Homeobox' domain profile. 1 37 IPR001356 GO:0003677
Sebi117g00058 213 SUPERFAMILY Homeodomain-like 6 42 IPR009057 -
Sebi117g00058 213 ProSiteProfiles START domain profile. 158 213 IPR002913 GO:0008289
Sebi117g00058 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 207 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00058 Sebi-Chr117 795120 795987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00058 2 210 Homeobox Transcription Factor Family AT1G73360 32.301 2.92e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00058 K09338 - gmx:100795075 209.534