Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00057 ATGTCTTATGACTCTTTTCGAGTCAACTCCCCTCTTTATCGCTCTTGGAGATACCCTTCTGGATGCATGATTCGTGAAATCTCTAATAGGTGTTGTGAGCTTATATGGGTTGAGCATGTGGAAGTGGATGATGAGATTCATACCCACCAACTATATAGAGATCTTGTTGGCGTCAATATTGCTTATGGAGCAGGAAGATGGATATTGGAACTTCAAAGAATGTGCGGGAGATTTGCTTCCTTTCGTGTTAAAAAGATACCTGATCAAAACTTTGGAGGAGTGATTGATTCACTTGAAGGGAGGAAAGGTGTAATGAATTCTTCTCATCAAATGGTTAAGACATTCTGTGAAAGTCTAACCATGTCAGGTCATGAGCCCGACTTCCCACATTTAACTATAGGAAATAATAATGGAGTTAGAATCAACGCTCGCAAAAGCATGGGTATAGGCCAACCAAATGGAACAATCGTTATGGCTTCTACCTCCATTTGGCTTCCTTTCCATTATGAGAAAGTTTTTGAGTTTCTCATAGATCACAAAAGACAAGCTCAGTGGGATGTTATTGCTCGTGGAAATCCAATGCATTTGGTTGCACACATTTCAAATGGAATTCATCTTGGCAACTGTATTTCAATTATTAAGGTCAAGTGTAGACAATAG 660 0.3939 MSYDSFRVNSPLYRSWRYPSGCMIREISNRCCELIWVEHVEVDDEIHTHQLYRDLVGVNIAYGAGRWILELQRMCGRFASFRVKKIPDQNFGGVIDSLEGRKGVMNSSHQMVKTFCESLTMSGHEPDFPHLTIGNNNGVRINARKSMGIGQPNGTIVMASTSIWLPFHYEKVFEFLIDHKRQAQWDVIARGNPMHLVAHISNGIHLGNCISIIKVKCRQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00057 219 ProSiteProfiles START domain profile. 1 80 IPR002913 GO:0008289
Sebi117g00057 219 SUPERFAMILY Bet v1-like 3 75 - -
Sebi117g00057 219 Pfam START domain 7 75 IPR002913 GO:0008289
Sebi117g00057 219 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 215 IPR042160 -
Sebi117g00057 219 SUPERFAMILY Bet v1-like 133 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00057 Sebi-Chr117 793520 794673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00057 14 214 Homeobox Transcription Factor Family AT1G73360 41.791 1.94e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00057 K09338 - gmx:100795075 283.878