Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi117g00023 ATGGACAATTACCAAGGCGATTTAACTGACATACTTCGTGCTAGTGGTGGAGCATACGGCACCACCTGCAGCACAGGAACTAGTTCATCATCTGCTCAACCACCTCATGATCATCACTGGCAGCAACAACACCACCAACAGTTCTCTTCTGATCCTTTGAGTTTCTCTAATTCTGTTCTGGAAGACGCTAGAGGAGGCACCTACTTTGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTATTATAGATGCAGCAGCTCAAAAGGTTGCTCTGCAAGGAAGCAAGTTGAGAGGAGCAGAACAGATCCAAATATGTTGGTTATTACTTACACTTCAGAGCACAACCATCCATGGCCAACTCAGAGAAATGCTCTGGCTGGTTCAACAAGATCCCAACCATCCAAGAACAATGCTACTTCTTCTTCTTCCAAGAATACTTCAGAAGCCTCTCAAAAGGGGACAACAAAGCCAAAAGAAGAGCAGCAAGAGAGCAATAGTGAAGGAAATAATTCCCCAGTTGTTGCTGGGAATTCAGGAAACAGTGTGAAGGAAGAGATGGAAGATATAGAGAAGCAGCTTGAGATGGAAGATGGAGAATTCAGTGATGGACTTCCTTATAAGCCATCTTTGATGGAGAGTAACCAGTCATCAGAGGATTTCTTTGCAGAATTGGGAGAAATAGAAGCTGATCCATTAAACCTGTTGTTTAGTCAAGGTTTTGGTGATCAAAGGGATCAATCCAAGGCATTAGATCCATTCCATCTGTTTGACTGGTCAGGAGATAATCACAACAATACCAACTCATTGGAAGAACCTAATAAGAGAAGGTTATAA 906 0.4305 MDNYQGDLTDILRASGGAYGTTCSTGTSSSSAQPPHDHHWQQQHHQQFSSDPLSFSNSVLEDARGGTYFAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNATSSSSKNTSEASQKGTTKPKEEQQESNSEGNNSPVVAGNSGNSVKEEMEDIEKQLEMEDGEFSDGLPYKPSLMESNQSSEDFFAELGEIEADPLNLLFSQGFGDQRDQSKALDPFHLFDWSGDNHNNTNSLEEPNKRRL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi117g00023 301 FunFam probable WRKY transcription factor 14 67 136 - -
Sebi117g00023 301 Pfam WRKY DNA -binding domain 84 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi117g00023 301 MobiDBLite consensus disorder prediction 21 37 - -
Sebi117g00023 301 MobiDBLite consensus disorder prediction 280 301 - -
Sebi117g00023 301 MobiDBLite consensus disorder prediction 188 202 - -
Sebi117g00023 301 Gene3D WRKY domain 69 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi117g00023 301 MobiDBLite consensus disorder prediction 21 56 - -
Sebi117g00023 301 ProSiteProfiles WRKY domain profile. 77 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi117g00023 301 MobiDBLite consensus disorder prediction 134 176 - -
Sebi117g00023 301 MobiDBLite consensus disorder prediction 134 241 - -
Sebi117g00023 301 SUPERFAMILY WRKY DNA-binding domain 80 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi117g00023 301 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 28 260 IPR044810 GO:0003700
Sebi117g00023 301 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi117g00023 Sebi-Chr117 388564 390871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi117g00023 70 301 WRKY Transcription Factor Family AT1G30650 52.564 2.28e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi117g00023 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi117g00023 - - aprc:113852911 362.459