Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1179g00002 ATGTCACCGTCGTCGTCAACCGGAAACTGCAGCAAAATCCGTCGCATTGTTCGTCTCCGGCAAATGCTTCTCCGGTGGCGAACGAAAGCGCGGTTAGCGTCGTCCGATGTTCCGGCAGGACACGTGGCGGTGTGTGTGGGTCCCAGCAGGAGGAGGTTCATCGTGCGCGCTAGTTACCTGAACCACCCGATCTTCAAGAAGCTTCTGGTAATGGCGGAGGAAGAGTACGGGTTCTGCAACCATGGCCCGCTCGCTATCCCTTGCGATGAGTCTCTATTTGAAGAGCTTCTTCGGGTCATGGCCCGACCCGAACCCAGATTCTCCACGCTCGAAGATTTCCAGAGACGCTGCCACGTGGATATCCGAAGTAGTTACCCAGATTCATGGCCCTTGCTTCATGACGATCCAATCTGCTGA 417 0.5588 MSPSSSTGNCSKIRRIVRLRQMLLRWRTKARLASSDVPAGHVAVCVGPSRRRFIVRASYLNHPIFKKLLVMAEEEYGFCNHGPLAIPCDESLFEELLRVMARPEPRFSTLEDFQRRCHVDIRSSYPDSWPLLHDDPIC 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1179g00002 138 Pfam Auxin responsive protein 19 99 IPR003676 GO:0009733
Sebi1179g00002 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1179g00002 Sebi-Chr1179 40976 41392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1179g00002 8 132 Calmodulin-binding Proteins AT4G34750 52.143 2.51e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1179g00002 K14488 - gmx:100795345 211.846