Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1173g00006 ATGAACCCATCACCAGTTTGCAGGAAGTGCATATATGAGAAACTCTCGGATGAGGAGATGGATTGCTGTCCAGTGTGCAACATTGATCTAGGCTGCCTTCCGGTTGAAAAACTCAGATATGAAAACTCCAATAAGAGTGATGTCTTCCTCAAATTTAAGCATGCTAGGCCGGACCATAATTTGCAAGATATAAGGGCAAAAATATTCCCTTTTAAGAGAAAAAAGATCAAGGCCCCAGAAGTTGTGTCTTCAATAACCTTGCCAGCAAAAAGGAAAGAAAGATCACTTTCGTCATTGGTGGTTAGTGCTCCCAAAGTTTCAATGCAAACTGGCTTTACTGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTGCTGCATTACGTGGATGCAGTTTTATACTTGAAGACTCCATAAAGAAGGAAGAAACAAATGGTGAAGATAACACTGATTCTTCTATGGCTGAGACTTCTAAGAAGCATAAGCCCAACAATGAAGATACAGAGAACAATGTGGAACTTACAGAAGGGAAGGTCGATCTCTGGACACCATTGAATTGTCTTGTTGAAGCTGCCAACAGAACAAAGTCCTCCAGGACAAATTCACATTCAAATTTTGTTGCCAAATTAGAGTCTACATCCACTCCTCTTGGTGGACTAGATACTCCTGAAATTAAAACCAAAACAGACCTACCTGCTTCTATGCAGAGTGAATTTAACATTCCTAAAACCAAAAACAAGGATACTGGACATAAAACAATATTTCGAGATGACAAAGACAAGAACAGCTTGCCTTCAGGACCAGCCAAGCGAAGAAGGTTGCGTCCTGCTGGTCAGAAAAGAGTTGCCGCATATGAGATGTCTGCCTCAGCTCCAGCCATGCTAGATGCAACAGGGGGAAAATGCAAAAGAAAAAACAGTCCTATCTGGTTTTCATTAGTCGCTTCAGAGGACCAGAAAGGAGTTGTTCCCTTGCCACAGATCTCAGCATGTTACTTAAGAATCAAAGATGGTACAGTGCCTGTCACATTTATACAAAAGTACCTTGTGAAGAAACTTAATCTTGCCAGCGAAACTGAG 1077 0.4123 MNPSPVCRKCIYEKLSDEEMDCCPVCNIDLGCLPVEKLRYENSNKSDVFLKFKHARPDHNLQDIRAKIFPFKRKKIKAPEVVSSITLPAKRKERSLSSLVVSAPKVSMQTGFTGKRTKTSTRKAAALRGCSFILEDSIKKEETNGEDNTDSSMAETSKKHKPNNEDTENNVELTEGKVDLWTPLNCLVEAANRTKSSRTNSHSNFVAKLESTSTPLGGLDTPEIKTKTDLPASMQSEFNIPKTKNKDTGHKTIFRDDKDKNSLPSGPAKRRRLRPAGQKRVAAYEMSASAPAMLDATGGKCKRKNSPIWFSLVASEDQKGVVPLPQISACYLRIKDGTVPVTFIQKYLVKKLNLASETE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1173g00006 359 MobiDBLite consensus disorder prediction 141 171 - -
Sebi1173g00006 359 MobiDBLite consensus disorder prediction 243 266 - -
Sebi1173g00006 359 Coils Coil 349 359 - -
Sebi1173g00006 359 MobiDBLite consensus disorder prediction 240 276 - -
Sebi1173g00006 359 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 6 359 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1173g00006 Sebi-Chr1173 83430 88174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1173g00006 7 335 C3H Transcription Factor Family AT2G30580 40.290 2.28e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1173g00006 K16277 - gmx:100783999 560.066