Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi116g00038 ATGGGTCGGCGAAAGAACAAGAATCAGAGCAACGAGGACGCTAACAACACGAACATGAGCCACCTTCGATTCCAGGATGCTGACGAGGTCATCGAGGATGTCGCTGAGACCTCCAACATCGACCAATCCATGTGTTTCGACCATGACGATTCTGATGACAAAACCAGCGCCGATTACTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAAATGTTGAAGGACACAGTAAGAACTAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAATAGTTCTTGATGTGGGTGCTGGGACTGGGATTTTATCACTATTCTGTGCCAAAGCAGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCCAAGGAGATAGTTGAAACTAATGGTTACTCTAATGTTGTAACGGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTCCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGCTGATGATGGAATTGTGCTACCAGATAAAGCATCCCTCTACCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATTAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGATCAGAATCAGATTGCTACAAACTGTCAACTACTCAAGACAATGGACATCTCAAAGATGACTCCTGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTTGCTGAACGTGACGATTATATTCATGCTCTTGTTGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGGCCAAGGTCACGAGCTACACATTGGAAACAAACTGTCCTATATCTGGAAGATATCTTGACAATTTGTGAGGGGGAGACAATTGTAGGGAGCATGACTGTGGCTCCAAACAAAAAAAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGCAAGCGATGCAATGCTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1137 0.4055 MGRRKNKNQSNEDANNTNMSHLRFQDADEVIEDVAETSNIDQSMCFDHDDSDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKNKIVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGYSNVVTVLKGKIEEIELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGIVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMTPGDCSFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDILTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGKRCNASRVQYYKMR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi116g00038 378 Gene3D Vaccinia Virus protein VP39 48 200 IPR029063 -
Sebi116g00038 378 MobiDBLite consensus disorder prediction 1 22 - -
Sebi116g00038 378 CDD AdoMet_MTases 99 199 - -
Sebi116g00038 378 FunFam probable protein arginine N-methyltransferase 1 48 200 - -
Sebi116g00038 378 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 57 358 IPR025799 GO:0016274|GO:0018216
Sebi116g00038 378 FunFam Blast:Protein arginine N-methyltransferase 1 202 378 - -
Sebi116g00038 378 Gene3D - 202 378 - -
Sebi116g00038 378 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 365 IPR025799 GO:0016274|GO:0018216
Sebi116g00038 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 377 IPR029063 -
Sebi116g00038 378 Pfam Ribosomal protein L11 methyltransferase (PrmA) 93 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi116g00038 Sebi-Chr116 837779 840720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi116g00038 60 341 C2H2 Transcription Factor Family AT3G12270 39.474 1.90e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi116g00038 K11434 - gmx:100781777 681.019